PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr1P18110_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

NAC

Protein Properties

Length: 217aa MW: 24632.5 Da PI: 8.8827

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr1P18110_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	78.7	1.3e-24	4	114	25	128
NAM 25 gkkleleevikevdiykvePwdLpk.......kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kgelvglk 103 g+kl++ ++i+++++y+++Pw++ + ++ +e+ew+f+++rd+k+ g r++r+t++g Wk tg d++v s+ ++l+glk GSMUA_Achr1P18110_001 4 GTKLQF-QIITTIHLYRHDPWEIITtfhltaiTACMGEREWHFYVPRDRKQG-GGRPSRTTERGLWKVTGCDRPVRSAtdPKRLIGLK 89 555666.78************7446676553334899******975.89*****************98766778 PP NAM 104 ktLvfykgrapkgektdWvmheyrl 128 ktLv+ +grap+g+ +d vm+eyrl GSMUA_Achr1P18110_001 90 KTLVYCQGRAPRGTMADRVMNEYRL 114 *********************98 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS51005	31.425	1	133	IPR003441	NAC domain
SuperFamily	SSF101941	3.4E-28	2	133	IPR003441	NAC domain
Pfam	PF02365	2.8E-7	29	114	IPR003441	NAC domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003677	Molecular Function	DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 217 aa Download sequence Send to blast
MIHGTKLQFQ IITTIHLYRH DPWEIITTFH LTAITACMGE REWHFYVPRD RKQGGGRPSR 60 TTERGLWKVT GCDRPVRSAT DPKRLIGLKK TLVYCQGRAP RGTMADRVMN EYRLARELIP 120 TEGVIVLCKI CRKATSMKEL EQRAAAMEEK TSASQVSGSV AVSSPGWSDQ ESFQMTCTYV 180 MDVLCDHTQE EEEVGVPAAD KRRNAIMHQL LILRLGI

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
3ulx_A	1e-24	4	114	39	140	Stress-induced transcription factor NAC1
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Functional Description ? help Back to Top
Source	Description
UniProt	Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269\|PubMed:26834774}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269\|PubMed:26834774}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009414556.1	1e-135	PREDICTED: NAC domain-containing protein 35-like
Swissprot	Q10S65	9e-57	NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBL	M0S0W9	1e-161	M0S0W9_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr1P18110_001	1e-162	(Musa acuminata)

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	1e-48	NAC domain containing protein 36

Publications ? help Back to Top
Hong Y,Zhang H,Huang L,Li D,Song F Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice. Front Plant Sci, 2016. 7: p. 4 [PMID:26834774]