PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr2P13380_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 366aa    MW: 40824.2 Da    PI: 6.7795
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr2P13380_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like100.51.1e-31248303156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W++eLH+rFv a+eqLGG+++AtPk+i+elmkv+gLt+++vkSHLQkYRl+
  GSMUA_Achr2P13380_001 248 KERRCWSQELHRRFVLAIEQLGGTQVATPKQIRELMKVEGLTNDEVKSHLQKYRLH 303
                            68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.462245305IPR017930Myb domain
SuperFamilySSF466891.49E-17246306IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.601.0E-28247307IPR009057Homeodomain-like
TIGRFAMsTIGR015573.1E-26248303IPR006447Myb domain, plants
PfamPF002494.4E-7250301IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 366 aa     Download sequence    Send to blast
MGSALAEMGL ELELCAMRTT VCGFVKEASA IESVGGGRAT RLEASIKSLE EEKRKIEAFR  60
RELPLCMRLL SEVIEELRRE IDRCHGESFG CIVEEFIPIK SKVGDDGGIK VESDCKDKMN  120
WMSSVQLWSD NYIENNDDDK AIAKEKDGVV DRRQEEQSNL ECKNRRSGAA LSLFKGLPPL  180
AARSMTEDKP TASLPELSLQ SAVIKSNPDV VTPVTVDHRG GSAKGARKSP ELFRATLSVQ  240
SQQQPPRKER RCWSQELHRR FVLAIEQLGG TQVATPKQIR ELMKVEGLTN DEVKSHLQKY  300
RLHARKMTTS WATASHSVPV IWVREEQYTS SSQQSISQAG SPTSPLQLTA ADSSEEDGKS  360
ESYNWK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009388926.10.0PREDICTED: myb family transcription factor EFM-like isoform X1
RefseqXP_009388928.10.0PREDICTED: myb family transcription factor EFM-like isoform X1
TrEMBLM0S7M90.0M0S7M9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P13380_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.14e-47G2-like family protein