PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr2P13710_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family SAP
Protein Properties Length: 404aa    MW: 45174.4 Da    PI: 6.2352
Description SAP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr2P13710_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SAP419.53.2e-1282540275453
                    SAP  75 nvfqvcstwravsrsdllwqrltrriWrrtkllrdtWreeyiyrhrtarnfrtrrysyvtlqfdpadvdedndadalsCrclalsdky 162
                            n +qvcstwra s s+llwq ltrr+W+  ++    Wr+e++  hrta+nfr rry+y +l   p+      ++ alsCr+lalsd +
  GSMUA_Achr2P13710_001  25 NYWQVCSTWRAASLSELLWQDLTRRVWTSRDRSPPSWRDEFVRLHRTAANFRARRYAYSHL--LPS------SPVALSCRRLALSDDH 104
                            678******************************************************9865..443......4689************ PP

                    SAP 163 laaGfadGavrlfdletrlhvstflpq.hrdrlGrfsravsGivis..dsrlvfatldGdihvavidgagaaaarrallGdvvndGal 247
                            laaGf +G+v +fdl + + + t++p+ h drlGrfsra+sGiv++  d rl+fa+ dGd+hv  + +  a++ +ra++G++++dG+l
  GSMUA_Achr2P13710_001 105 LAAGFLNGSVCVFDLPAGQLLATYWPNpHLDRLGRFSRAISGIVLAepDERLAFASQDGDVHVVRLSI--AGSVQRAHVGNLMEDGTL 190
                            *************************97589***************844689*****************..558899************ PP

                    SAP 248 vdfaGsgrWwvGlyaGvpGrafhiWdaeteelvfvGGsltdPeavmGWhmltelt.elvGrvrvteretavaCtslrlvvfdlrnqgv 334
                            vdf+G+grWwvGl+aGvpGr++++Wda te+lv+vGG+ltdP+av GWhml +l   lvGrvr+ e  +av  t +++ v+dl + g 
  GSMUA_Achr2P13710_001 191 VDFTGNGRWWVGLFAGVPGRSWRVWDAATEQLVYVGGTLTDPDAVLGWHMLIDLSsPLVGRVRIVEPGFAVGFTDSSMEVVDLNDTGA 278
                            ******************************************************95689***************************99 PP

                    SAP 335 vlreeeerrGlivssldasneayvvvdsrGvatvrrvenleevcrfrv.rg.....aqrgvlgCvnggyalvyaggvlrvWeiekkeg 416
                            ++   e  +G +v s+da ++ ++vvdsrG a+v+ v  l+e+crf+  r+       +++ +C+n+ ya+v ++  +r+W+  + e 
  GSMUA_Achr2P13710_001 279 MVIRLELPHGAVVDSVDACEDRVIVVDSRGLAMVHWVPALQEICRFSTlRRaedqhELGEMSVCMNRNYAVVRSADRIRMWDATTGE- 365
                            9999******************************************75244554344567899*******************99966. PP

                    SAP 417 ylyslrervgevnalvaddrhvavsssdgtihlldfg 453
                            ylys+rer+ge+  + a+dr+va+ ++d+ +hl+dfg
  GSMUA_Achr2P13710_001 366 YLYSFRERIGEALVVAASDRYVAAWATDTGLHLWDFG 402
                            ************************************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF813835.67E-52771IPR001810F-box domain
Gene3DG3DSA:1.20.1280.505.8E-52879No hitNo description
Gene3DG3DSA:2.130.10.102.2E-1598223IPR015943WD40/YVTN repeat-like-containing domain
SuperFamilySSF509983.92E-2099400IPR011047Quinoprotein alcohol dehydrogenase-like superfamily
Gene3DG3DSA:2.130.10.102.2E-15281401IPR015943WD40/YVTN repeat-like-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009554Biological Processmegasporogenesis
GO:0009908Biological Processflower development
GO:0030163Biological Processprotein catabolic process
GO:0046622Biological Processpositive regulation of organ growth
GO:0005634Cellular Componentnucleus
GO:0005515Molecular Functionprotein binding
Sequence ? help Back to Top
Protein Sequence    Length: 404 aa     Download sequence    Send to blast
MHINKLTVIA ASTIAPYMRL SIWGNYWQVC STWRAASLSE LLWQDLTRRV WTSRDRSPPS  60
WRDEFVRLHR TAANFRARRY AYSHLLPSSP VALSCRRLAL SDDHLAAGFL NGSVCVFDLP  120
AGQLLATYWP NPHLDRLGRF SRAISGIVLA EPDERLAFAS QDGDVHVVRL SIAGSVQRAH  180
VGNLMEDGTL VDFTGNGRWW VGLFAGVPGR SWRVWDAATE QLVYVGGTLT DPDAVLGWHM  240
LIDLSSPLVG RVRIVEPGFA VGFTDSSMEV VDLNDTGAMV IRLELPHGAV VDSVDACEDR  300
VIVVDSRGLA MVHWVPALQE ICRFSTLRRA EDQHELGEMS VCMNRNYAVV RSADRIRMWD  360
ATTGEYLYSF RERIGEALVV AASDRYVAAW ATDTGLHLWD FGDM
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389753.10.0PREDICTED: transcriptional regulator STERILE APETALA-like
TrEMBLM0S7R20.0M0S7R2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr2P13710_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP1848179
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G35770.11e-100SAP family protein