PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P17390_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 172aa    MW: 19937.1 Da    PI: 10.6077
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P17390_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM24.38.4e-08519386128
                    NAM  86 tgkdkevlskkgelvglkktLvfy.kgrapkgektdWvmheyrl 128
                               dk +++ ++++  +kktL +y  g+ p+g kt+ vmh y+l
  GSMUA_Achr3P17390_001  51 NRADKIITC-SSKDAAMKKTLRYYyIGQPPEGIKTNRVMHRYHL 93 
                            444555555.9999*******998679***************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019411.83E-102899IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 172 aa     Download sequence    Send to blast
MCPIVPKWFA YILSSCFTFQ FRYIGLCPSF LGKALQGGDR FWCFFTRRKQ NRADKIITCS  60
SKDAAMKKTL RYYYIGQPPE GIKTNRVMHR YHLLDGILGS SPSGGSSSST STRGKRRRAV  120
CTYYYHELNR WVIRRVHEST SSSQASFRGS KRYSYPWMIS MKYACQIKTA IP
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009404854.18e-25PREDICTED: NAC domain-containing protein 104-like isoform X1
TrEMBLM0SFF51e-125M0SFF5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P17390_0011e-126(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G27410.32e-09NAC family protein