PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P19190_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 341aa    MW: 37922.6 Da    PI: 7.2853
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P19190_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_121.93.7e-071982451461
                            HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  14 ReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklks 61 
                            R + +rsR RK+++i+eLe+ v+ L++   +L+ ++ +l +   +l  
  GSMUA_Achr3P19190_001 198 RRSGQRSRVRKLQYIAELERSVDILQTLGADLAARVASLFQYRLALSV 245
                            77899***********************99999999888776666655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003380.0089189249IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-6198259No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 341 aa     Download sequence    Send to blast
MSRPAPLPPR CPFQNRGVTR RALESKPQTT QTDDKLCAKH HRFPSHGSLL DEQPLWLDDL  60
LTDPEISPRG ISLQRSSSDP VALLEVATSF HGPISPITEE DALSDGILHE SRESEEASEI  120
GYGFEVGNCV YGPNSPRKKT KMDDLESSVV TALLKDVPSN PLQYLTVDYP STSVINELNE  180
KEDSTSSGNL DSESISRRRS GQRSRVRKLQ YIAELERSVD ILQTLGADLA ARVASLFQYR  240
LALSVENKKL RQQLASLQQE KIIKHGQHQS LKNEAERLRM IYGRHRRSKS AASCFGTSPS  300
VVVVDPSPID WQTLDLGKLS LGGNQVSMKH GLARETNRDM T
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1197203RRSGQRS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018678535.10.0PREDICTED: basic leucine zipper 34-like isoform X2
TrEMBLM0SFY50.0M0SFY5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P19190_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP81372631
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.12e-16bZIP family protein