PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P21790_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 152aa    MW: 16765.6 Da    PI: 5.724
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P21790_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP254.52.8e-171060155
                    AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
                           ++ykGVr+++ +g+Wv+eIr+p     +  r +lg++ t+e Aa a++ a   l+g
  GSMUA_Achr3P21790_001 10 TKYKGVRRRR-WGKWVSEIRVPG----TgDRLWLGSYATPEAAAVAHDTAVFFLRG 60
                           69*****777.**********83....35**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008474.9E-101060IPR001471AP2/ERF domain
CDDcd000182.71E-241071No hitNo description
Gene3DG3DSA:3.30.730.102.4E-261171IPR001471AP2/ERF domain
SuperFamilySSF541713.4E-181171IPR016177DNA-binding domain
SMARTSM003805.0E-291176IPR001471AP2/ERF domain
PROSITE profilePS5103221.4561170IPR001471AP2/ERF domain
PRINTSPR003673.3E-81223IPR001471AP2/ERF domain
PRINTSPR003673.3E-83450IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 152 aa     Download sequence    Send to blast
MSHGQEGGET KYKGVRRRRW GKWVSEIRVP GTGDRLWLGS YATPEAAAVA HDTAVFFLRG  60
PSHAGRLNFP DRAVALTWAC LSPPSVQRAA SESGMAVDAQ MQEAAWREER RQPPSSDVSS  120
ERVSRREAGD SDVSMGSELY GDISVDDMEI WV
Functional Description ? help Back to Top
Source Description
UniProtProbably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00158DAPTransfer from AT1G22810Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009394039.11e-107PREDICTED: ethylene-responsive transcription factor ERF019-like
SwissprotO805425e-32ERF19_ARATH; Ethylene-responsive transcription factor ERF019
TrEMBLM0SGP51e-106M0SGP5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P21790_0011e-106(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP64332951
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G22810.13e-34ERF family protein
Publications ? help Back to Top
  1. Scarpeci TE,Frea VS,Zanor MI,Valle EM
    Overexpression of AtERF019 delays plant growth and senescence, and improves drought tolerance in Arabidopsis.
    J. Exp. Bot., 2017. 68(3): p. 673-685
    [PMID:28204526]