PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr3P25020_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 332aa    MW: 37049.9 Da    PI: 8.8136
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr3P25020_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_131.24.8e-104888545
                           CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1  5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
                           k  rr+++NReAAr+sR+RKka++++Le    +L++  ++L
  GSMUA_Achr3P25020_001 48 KTVRRLAQNREAARKSRLRKKAYVQQLESSRLKLTQLEQEL 88
                           6789************************9777777666555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.8E-944107IPR004827Basic-leucine zipper domain
PfamPF077162.9E-74590IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.4154690IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.8E-84893No hitNo description
SuperFamilySSF579594.0E-74891No hitNo description
PROSITE patternPS0003605166IPR004827Basic-leucine zipper domain
PfamPF141441.0E-30130205IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009410Biological Processresponse to xenobiotic stimulus
GO:0009627Biological Processsystemic acquired resistance
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MADVSPRTDT STDVDTDDKD KRLERGQHAV VAASDSSDRS KDKTLDQKTV RRLAQNREAA  60
RKSRLRKKAY VQQLESSRLK LTQLEQELQR ARQQGIFISG SGDQSHAMGG NGALAFDVEY  120
ARWLEEHNRQ INELRSAVNA HASENDLCVI VDGVMAQYDE IFRLKGIAAK ADVFHILSGM  180
WKTPAERCFL WLGGFRSSEL LKLLANQLEP LTEQQMMGIC NLQQSSQQAE DALSQGMEAL  240
QQSLAETLAG SLAPSGSSGN VANYMGQMAM AMGKLGTLEN FLRQADNLRQ QTLQQMHRIL  300
TTRQSARALL AIHGYFSRLR ALSSIWLARP RD
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00349DAPTransfer from AT3G12250Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKF5825520.0KF582552.1 Musa acuminata AAA Group cultivar Cavendish bzip transcription factor (TGA1) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009393095.10.0PREDICTED: transcription factor TGA2.2-like isoform X2
SwissprotQ415580.0HBP1C_WHEAT; Transcription factor HBP-1b(c1) (Fragment)
TrEMBLM0SHL80.0M0SHL8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr3P25020_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP48638185
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06950.41e-162bZIP family protein