PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P06660_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 192aa    MW: 20581.3 Da    PI: 10.1031
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P06660_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2673.6e-213484155
                    AP2  1 sgykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           ++++GVr ++ +gr++AeIrd ++    ++r +lg+f+taeeAa+a+++a+++l+g
  GSMUA_Achr4P06660_001 34 THFRGVRKRP-WGRFAAEIRDpWK----KTRKWLGTFDTAEEAARAYDEAARSLRG 84
                           589*******.**********883....5*************************99 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008478.5E-143484IPR001471AP2/ERF domain
CDDcd000183.18E-273491No hitNo description
PROSITE profilePS5103222.2473592IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.108.8E-313591IPR001471AP2/ERF domain
SMARTSM003806.7E-343598IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-213592IPR016177DNA-binding domain
PRINTSPR003672.4E-103647IPR001471AP2/ERF domain
PRINTSPR003672.4E-105874IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MALETLRLRK GGFAAAAAEN KGSTAVLGGE VTETHFRGVR KRPWGRFAAE IRDPWKKTRK  60
WLGTFDTAEE AARAYDEAAR SLRGPKAKTN FGCPGDHGIQ SSGPQISWGA VPRWRSALDG  120
RDLTIGPPPA LAGGGSGCLG YRLGTVEVAT RGDQEMEKAL GAAMGRKVED EAEAAKQKQP  180
FSFDLNLPAP LF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A8e-1936911571Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018680841.11e-137PREDICTED: ethylene-responsive transcription factor 3-like
TrEMBLM0SLN31e-136M0SLN3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P06660_0011e-136(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP10337465
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G50640.13e-24ethylene responsive element binding factor 3