PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P10150_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 227aa    MW: 25065.2 Da    PI: 6.0309
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P10150_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_125.33.2e-0871120150
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 
                            e+e kr r+   N+eA r++R++Kka  + Lee+vk+L   N++L  +l+
  GSMUA_Achr4P10150_001  71 EEEPKRYRKPLGNKEAVRKYREKKKAHAAFLEEEVKKLRLVNQQLLRRLQ 120
                            67889****************************************98876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1703.0E-1469138No hitNo description
SMARTSM003384.0E-1071138IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.53173120IPR004827Basic-leucine zipper domain
PfamPF077161.3E-1073128IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.44E-775132No hitNo description
CDDcd146862.30E-876129No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 227 aa     Download sequence    Send to blast
MDDGDVDLSS HLLVSDPEIN QSFDEFLRST STCTHTHTCN LPGPAAATHT HTCYHTHTQV  60
FAAGEGESVG EEEPKRYRKP LGNKEAVRKY REKKKAHAAF LEEEVKKLRL VNQQLLRRLQ  120
GQAALEAEVI RLRNLLVDFR GKIDAELGGF PFQNQCRPGC LQCDADGQCI SQNLAAIDWE  180
GSHVPAITNC QINPSGDIIM RQKPEIAEAV NSMNVVGSLI SSASQTE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018680726.11e-171PREDICTED: basic leucine zipper 23-like
TrEMBLM0SMN21e-170M0SMN2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P10150_0011e-170(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP38313675
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G16770.12e-22bZIP family protein