PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P10560_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 271aa    MW: 29394.9 Da    PI: 6.3737
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P10560_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_129.51.6e-09154189540
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLea 40 
                            kr +r   NR +A+rsR RK+++i eLe+ v +L+a
  GSMUA_Achr4P10560_001 154 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQA 189
                            8999****************************9987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-8150213IPR004827Basic-leucine zipper domain
PROSITE profilePS502178.508152189IPR004827Basic-leucine zipper domain
PfamPF001701.3E-8154191IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.7E-11154205No hitNo description
SuperFamilySSF579591.21E-8154189No hitNo description
CDDcd147034.04E-23155204No hitNo description
PROSITE patternPS000360157172IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 271 aa     Download sequence    Send to blast
MSNNWPYFAH HHDHSSALAP HQLPPAVGPG GAAAPASWAD EFLDFAAARR GHRRRSANDS  60
VSFIGAPLAD ECPGFDRLDD DQLLSMFSDE VPPPSSSSAG VPVSSTSTPL DHGSIHEAKP  120
AAGPEEVQSV CKTEADASAL APPAAGSEPI LDPKRVKRIL ANRQSAQRSR VRKLQYISEL  180
ERSVTTLQAL SALSPRVAFL DHQRSILAMD NSHLKQRIAV LAQDKIFKDA HQEALKKEVE  240
RLKQVYHQQN VDEMAASTSE PVGLAEKELI D
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009396669.20.0PREDICTED: basic leucine zipper 19-like
SwissprotQ9M2K42e-74BZP61_ARATH; Basic leucine zipper 61
TrEMBLM0SMS30.0M0SMS3_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P10560_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-63bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]