PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P11610_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 298aa    MW: 31492.3 Da    PI: 5.6257
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P11610_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_162.96.2e-20186248163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkr+rrkq+NRe+ArrsR+RK+ae eeL++++++L + N +L+ el +++k ++ l s++
  GSMUA_Achr4P11610_001 186 ERELKRQRRKQSNRESARRSRLRKQAEYEELAQRAEALREDNASLRAELTRINKDYEHLLSQN 248
                            89**********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF165966.5E-3544159No hitNo description
Gene3DG3DSA:1.20.5.1707.8E-17179246No hitNo description
SMARTSM003381.4E-18186250IPR004827Basic-leucine zipper domain
PfamPF001707.0E-19186248IPR004827Basic-leucine zipper domain
PROSITE profilePS5021712.679188251IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.63E-10189246No hitNo description
CDDcd147022.19E-22191241No hitNo description
PROSITE patternPS000360193208IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 298 aa     Download sequence    Send to blast
MYPPGGLYSH PSIPPGAHPF SPYAMASPSS NIEASGTAPG VDIDGKNNSE PGKLSGQPAN  60
GAFSQSGESG SESSSEGSDA NSQNDSHPKT TGGHESLGAE ASQSGSQNGV TRTPSQAMLS  120
HPMSMVPMPA TAPGAVAGPT TNLNIGMDYW GAPSSSPIPM HGKIPATAVG GAAVPGAPSD  180
IWLQDERELK RQRRKQSNRE SARRSRLRKQ AEYEELAQRA EALREDNASL RAELTRINKD  240
YEHLLSQNTL LKEKLGEAKQ GTEDQTLDRK EQHSGDGPSR NLDTEAQTAE TEQVRSGV
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1202208RRSRLRK
2202209RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009396117.10.0PREDICTED: transcription factor HBP-1a-like isoform X2
SwissprotA0A3B6MPP57e-83BZP1D_WHEAT; bZIP transcription factor 1-D
SwissprotB6E1076e-83BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLM0SN260.0M0SN26_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P11610_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.15e-56basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]