PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P13650_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 165aa    MW: 18106.5 Da    PI: 7.5429
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P13650_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like44.82.7e-1441712555
                G2-like 25 ekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                             AtPk+i++lm+v+ Lt +++kSHLQk+R+
  GSMUA_Achr4P13650_001 41 AAATPKQIRKLMEVDELTGDEIKSHLQKFRI 71
                           67****************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.1E-114175IPR009057Homeodomain-like
TIGRFAMsTIGR015575.6E-124272IPR006447Myb domain, plants
SuperFamilySSF466892.33E-54274IPR009057Homeodomain-like
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 165 aa     Download sequence    Send to blast
MNGSCMHWSS SVAAMVGSQL RFSSSPCVGT YQSVNINCLS AAATPKQIRK LMEVDELTGD  60
EIKSHLQKFR IQSRRTSSMH HSSSNTSSAD FVVVRGIWIP TPEYSSICMA ADEAAAHPGN  120
LTKSAHFLRL LVAVALTGEI QSVRATEEDD LQHRVTVETI NPRWC
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM0SNN01e-120M0SNN0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P13650_0011e-120(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G13300.11e-14G2-like family protein