PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P18980_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 403aa    MW: 43816.6 Da    PI: 5.8631
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P18980_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.93.9e-22291350160
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 
                            e+elkr+rrkq+NRe+ArrsR+RK+ae eeL+++v++L++eN+aL+ e++++kke++ l 
  GSMUA_Achr4P18980_001 291 ERELKRQRRKQSNRESARRSRLRKQAEYEELAQRVEVLKEENSALRAEVDRIKKEYDGLI 350
                            89*****************************************************98775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077779.2E-241186IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165966.9E-40124254No hitNo description
Gene3DG3DSA:1.20.5.1702.2E-18284349No hitNo description
SMARTSM003381.1E-21291355IPR004827Basic-leucine zipper domain
PfamPF001704.7E-20291349IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.415293356IPR004827Basic-leucine zipper domain
SuperFamilySSF579598.13E-12294350No hitNo description
CDDcd147021.26E-24296347No hitNo description
PROSITE patternPS000360298313IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 403 aa     Download sequence    Send to blast
MFWFYLVQEQ PPATSARPSV SVYPEWSGFQ AYSPMLPHGF FHSPMVSSPQ AHPYMWGAQQ  60
FMPTYGTPPP PYVMYPHGVY PHPSVPPGLH PFSPYATTFS NGTAEACGSV PASTGDAKSS  120
EGKERIPIQR SKGSLGSLNM ITGKKDNELD KTSGAANGVL APSSDSGNED SSERSDAYSL  180
TDSEPKTGVG QRPPDETSQN GTSGIMTAQS HATLHQTMQI MPMLAAGVPG VVSGPTTNLN  240
IGMDYWTAPT PSAISPLHGK VSATATTGSM VPGSLVEASE RVPSEIWLQD ERELKRQRRK  300
QSNRESARRS RLRKQAEYEE LAQRVEVLKE ENSALRAEVD RIKKEYDGLI AQNGSLQERT  360
GEQTKEEEDA IIKKCNQCAE DNTKRNLVSD PQAGQSDDKQ GGQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1307313RRSRLRK
2307314RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009397107.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_009397108.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_009397109.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_009397110.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_018680717.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_018680718.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
SwissprotB6E1071e-114BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLM0SQ610.0M0SQ61_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P18980_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.11e-110basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]