PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr4P29580_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 194aa MW: 21892.6 Da PI: 10.4671

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr4P29580_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	31.1	5.3e-10	122	174	5	54
CHHHCHHHHHHHHHHHHHHHHH..HHHHHHH.HHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka..eieeLee.kvkeLeaeNkaLkkeleelkk 54 + +r++kNRe+A rsR+RK+a i L e +v L+ eN++Lkk+ eel+ GSMUA_Achr4P29580_001 122 RHHKRMIKNRESAARSRARKQAwnLIHPLDElEVSHLKDENSKLKKQYEELRS 174 5689*****************84456777553688888888888888887765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.5E-6	118	188	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	3.69E-7	122	175	No hit	No description
CDD	cd14707	3.01E-20	122	176	No hit	No description
Pfam	PF00170	4.0E-8	122	175	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	2.9E-9	123	175	No hit	No description
PROSITE pattern	PS00036	0	125	140	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
MEEVWKDITL NTFHQERPIT PLDHHIYHHH HHANSSPSFK GMILQDFLTG PSNRPLPVSQ 60 TFQYLGPDAT NSHSNSSSSG HNASFISSAF SSVAVGPPSP TGLFSLCSKK RLQENPAIGV 120 DRHHKRMIKN RESAARSRAR KQAWNLIHPL DELEVSHLKD ENSKLKKQYE ELRSAIGNPL 180 PKRNPLRRST TAPF

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009398851.2	7e-98	PREDICTED: bZIP transcription factor 27-like
TrEMBL	M0ST70	1e-141	M0ST70_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr4P29580_001	1e-142	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP9764	30	44

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G35900.1	5e-22	bZIP family protein