PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr4P33130_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 368aa    MW: 40115.9 Da    PI: 9.548
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr4P33130_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1673.2e-21271334164
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkseve 64 
                            ++el+re+rkq+NRe+ArrsR+RK++e+eeL+++v  Le+eN+aL+ e+e+lkk+  +lk+e++
  GSMUA_Achr4P33130_001 271 DRELRREKRKQSNRESARRSRLRKQQECEELARRVTDLESENSALRVEIESLKKLRGELKAENK 334
                            689*********************************************************9985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077778.3E-1936112IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165963.6E-10138267No hitNo description
PRINTSPR000413.5E-6181203IPR001630cAMP response element binding (CREB) protein
Gene3DG3DSA:1.20.5.1701.4E-16267330No hitNo description
PRINTSPR000413.5E-6270286IPR001630cAMP response element binding (CREB) protein
SMARTSM003381.5E-18271335IPR004827Basic-leucine zipper domain
PfamPF001704.4E-19272334IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.185273336IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.25E-10274330No hitNo description
CDDcd147021.56E-20276324No hitNo description
PROSITE patternPS000360278293IPR004827Basic-leucine zipper domain
PRINTSPR000413.5E-6288308IPR001630cAMP response element binding (CREB) protein
PRINTSPR000413.5E-6308325IPR001630cAMP response element binding (CREB) protein
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0010310Biological Processregulation of hydrogen peroxide metabolic process
GO:0010629Biological Processnegative regulation of gene expression
GO:0090342Biological Processregulation of cell aging
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 368 aa     Download sequence    Send to blast
MNIEQIFKKI HLFRVFLSKC SHFRNLLTPT QEPPTPIPPA TTSVLPEWSA SLQAFYGRGA  60
AAMMPQAFYP PPPIAAPQPV VWGAQQVMPP YGSPIAYASF YPHGGFFAQP PMNAAMAYRT  120
PETQGRPPEA KDKQITSKGT SKDGGELTGK WGNGGKGTSG AAENSSQSDD SATEGSSDTR  180
EDGSQPKDHS LARKRSYGNM IAEGEASHPL DTAEHSGANA ESTYSGRSRT AKKLPVSAPG  240
RATLPGSQTN LNIGMDFWGA THAGSVPMKD DRELRREKRK QSNRESARRS RLRKQQECEE  300
LARRVTDLES ENSALRVEIE SLKKLRGELK AENKSIMEKL KQRYGPENFS ELGISIDPSK  360
LEPDGASG
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1287293RRSRLRK
2287294RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00039PBMTransfer from AT4G36730Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1867561e-102AC186756.1 Musa acuminata clone MA4_112I10, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009397218.10.0PREDICTED: G-box-binding factor 1-like
TrEMBLM0SU750.0M0SU75_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr4P33130_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21603692
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36730.12e-40G-box binding factor 1