PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P00310_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 90aa    MW: 10219.9 Da    PI: 10.6267
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P00310_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like91.57e-291867251
                G2-like  2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQ 51
                           pr+rWt++LH+rF++av++LGG++kAtPk+il+lm+vkgL ++hvkSHLQ
  GSMUA_Achr5P00310_001 18 PRIRWTEDLHRRFIQAVASLGGENKATPKQILRLMSVKGLGMSHVKSHLQ 67
                           8************************************************* PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129410.2371474IPR017930Myb domain
Gene3DG3DSA:1.10.10.602.4E-251467IPR009057Homeodomain-like
SuperFamilySSF466893.49E-141669IPR009057Homeodomain-like
TIGRFAMsTIGR015579.6E-241868IPR006447Myb domain, plants
PfamPF002491.8E-62168IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 90 aa     Download sequence    Send to blast
MTCFGRSGAR QYNRSETPRI RWTEDLHRRF IQAVASLGGE NKATPKQILR LMSVKGLGMS  60
HVKSHLQVCL YTFAAEIMSL LLSAYSFGLW
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4r_A5e-161967351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-161967351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-161967351Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-161967351Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtPutative transcription factor.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009399320.16e-43PREDICTED: uncharacterized protein LOC103983772
SwissprotQ700D97e-20MYBF_ARATH; Putative Myb family transcription factor At1g14600
TrEMBLM0SUG05e-61M0SUG0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P00310_0019e-62(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP54933758
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02060.14e-23G2-like family protein