PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P11220_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 263aa    MW: 28906.6 Da    PI: 11.1647
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P11220_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_128.14.4e-09187246657
                            HHHCHHHHHHHHHHHHHHHHH........HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   6 rerrkqkNReAArrsRqRKka........eieeLeekvkeLeaeNkaLkkeleelkkeva 57 
                            r +r++kNRe+A rsR+RK+a        +i eLe +v+ L +e ++L+keleel+  +a
  GSMUA_Achr5P11220_001 187 RHKRMIKNRESAARSRARKQAsppillsaYINELELEVARLLEEQSRLQKELEELRLAMA 246
                            89*****************95444444449************************987665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003385.3E-6182254IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.4E-12187242No hitNo description
SuperFamilySSF579591.21E-6187242No hitNo description
CDDcd147074.06E-19187244No hitNo description
PROSITE patternPS000360189204IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009911Biological Processpositive regulation of flower development
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:2000028Biological Processregulation of photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0043621Molecular Functionprotein self-association
Sequence ? help Back to Top
Protein Sequence    Length: 263 aa     Download sequence    Send to blast
MWRSEQGNHH GSTNNRVASS SSSSSSSSRS SPSSTTSSLL PQAPKRRTME EVWKDIGLRS  60
LHHQERLLTP LNHQRHSPTA SPSFRAIILQ DFLAGPLNRP HAAAKNSPLP PSTMPPTALS  120
LSPRLEIQLM GSDAHGNSNS SSNGCRASFI SPAFSDNMVR PPSPIGLFSF CSKEAMSEDP  180
AACGDLRHKR MIKNRESAAR SRARKQASPP ILLSAYINEL ELEVARLLEE QSRLQKELEE  240
LRLAMAGKHS KRNTLRRSST APF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018682175.11e-168PREDICTED: protein FD isoform X2
TrEMBLM0SXK10.0M0SXK1_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P11220_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.15e-17bZIP family protein