PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr5P11470_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 208aa    MW: 23333.5 Da    PI: 10.37
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr5P11470_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.62e-11136190556
                            CHHHCHHHHHHHHHHHHHHHHHH...HHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkae...ieeLeekvkeLeaeNkaLkkeleelkkev 56 
                            ++ +r++kNRe+A rsR+RK+a       Le +v  L++eN +Lk ++eel+  +
  GSMUA_Achr5P11470_001 136 RKHKRLIKNRESAARSRARKQAHpsfSSTLELEVSHLKEENAKLKRQNEELRLAM 190
                            789*******************8555789*********************98655 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003382.9E-8132199IPR004827Basic-leucine zipper domain
SuperFamilySSF579599.85E-9136187No hitNo description
Gene3DG3DSA:1.20.5.1701.7E-11136190No hitNo description
PfamPF001701.1E-9136187IPR004827Basic-leucine zipper domain
CDDcd147072.50E-21136193No hitNo description
PROSITE patternPS000360139154IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 208 aa     Download sequence    Send to blast
MEEVWKNVTL NSLYQDKPMT PVDCYRHDHP TSSPSFRGMI LQDFPAGPLN RPLTISPPAV  60
EELPVPPPPS PPAHPQTVLN LNSGLEFQHL VVDANSRSNA SNSNGRYSSA FSPTGLFSCC  120
SNRKMMRESL AIGIDRKHKR LIKNRESAAR SRARKQAHPS FSSTLELEVS HLKEENAKLK  180
RQNEELRLAM ATQLPKRNTL QRSSTPPF
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_018681627.11e-108PREDICTED: bZIP transcription factor 27-like
TrEMBLM0SXM61e-151M0SXM6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr5P11470_0011e-152(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP146021020
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G35900.14e-33bZIP family protein