PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P01090_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 413aa    MW: 44391.8 Da    PI: 6.5236
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P01090_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.32.6e-21301363163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkr+rrkq+NRe+ArrsR+RK+ e eeL+++v++L++eN+aL+ e+++++ke+++l +++
  GSMUA_Achr6P01090_001 301 ERELKRQRRKQSNRESARRSRLRKQVEYEELAQRVEVLKEENTALRAEVDRIRKEYDQLVAQN 363
                            89********************************************************98776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077774.1E-28295IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165961.6E-48134265No hitNo description
Gene3DG3DSA:1.20.5.1704.7E-17295361No hitNo description
SMARTSM003383.2E-21301365IPR004827Basic-leucine zipper domain
PfamPF001701.9E-19301363IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.645303366IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.75E-11304360No hitNo description
CDDcd147021.15E-22306357No hitNo description
PROSITE patternPS000360308323IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 413 aa     Download sequence    Send to blast
MGGSETDSKG PKTSAVQEQP PATSSNPSAS LCPDWSGFQA YSQIPPHGFF HSPIVSSPQA  60
HPYMWGPQHL MPPYGTPPPP YVMYPHGIYA HPSTPPGLHP FSPYAMTSPN GNAEAHGSIP  120
ASTEGDARSS EGKERNAIQK LKGSFGSLNM VTEKNKNELD KTSGAVNGIF SQSGDSGSEN  180
SSEGSDANSK NDSEPKTGGR HEPLDETSQN GTSGIATAST QTKSHQTVPV MPILAAGLPG  240
VVAGPTTNLN IGLDYWVGPT PSVNPPVYGK VPATVASGAT VTSTLVGGNE KVASEIWLQD  300
ERELKRQRRK QSNRESARRS RLRKQVEYEE LAQRVEVLKE ENTALRAEVD RIRKEYDQLV  360
AQNASLKERT GQTTKEKEDL VIKESSQYAD DNARRSLSSE PQEGQSDSKQ SGK
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1317323RRSRLRK
2317324RRSRLRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.2}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.2). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.2). {ECO:0000269|Ref.2}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009402947.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_009402949.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
RefseqXP_018682548.10.0PREDICTED: bZIP transcription factor 68-like isoform X1
SwissprotA0A3B6KF131e-122BZP1A_WHEAT; bZIP transcription factor 1-A
TrEMBLM0T3570.0M0T357_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P01090_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.14e-91basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]