PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr6P15970_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 194aa MW: 22306.9 Da PI: 8.5106

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr6P15970_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	48.6	1.7e-15	125	171	5	52
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 +r +r++kNRe+A rsR+RK+a++ eLe+k+ L++eN++Lkk+ +el GSMUA_Achr6P15970_001 125 RRHKRLIKNRESAARSRARKQAYTNELENKISLLQEENERLKKQ-KEL 171 799**************************************954.444 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PRINTS	PR00041	4.1E-5	32	54	IPR001630	cAMP response element binding (CREB) protein
PRINTS	PR00041	4.1E-5	120	136	IPR001630	cAMP response element binding (CREB) protein
SMART	SM00338	2.4E-10	121	188	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	11.208	123	168	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	3.3E-12	124	168	IPR004827	Basic-leucine zipper domain
CDD	cd14707	5.23E-19	125	171	No hit	No description
SuperFamily	SSF57959	2.25E-11	125	170	No hit	No description
Gene3D	G3DSA:1.20.5.170	5.7E-14	125	173	No hit	No description
PROSITE pattern	PS00036	0	128	143	IPR004827	Basic-leucine zipper domain
PRINTS	PR00041	4.1E-5	138	158	IPR001630	cAMP response element binding (CREB) protein

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 194 aa Download sequence Send to blast
METDRGCGCG CEGSIPAPHA VNRTTADEVW RDIRQRRRKE SREQQPALGE MILEDFLVNA 60 EVGAEDSCIA FMPREHWLQH RHCDHHHQQL QASALASDNP ATSDPQTPGR KRAAGGEVSE 120 KTAERRHKRL IKNRESAARS RARKQAYTNE LENKISLLQE ENERLKKQKE LESAIHEPQP 180 ETKYQLRRTR SVPF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009404690.2	1e-143	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	8e-47	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M0T7E5	1e-141	M0T7E5_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr6P15970_001	1e-142	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP2707	38	83

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G56850.1	8e-43	ABA-responsive element binding protein 3

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]