PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P26930_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 253aa    MW: 27993.6 Da    PI: 9.7705
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P26930_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.22.6e-11135179549
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 
                            kr +r   NR +A+rsR RK+++i eLe+ v +L++e +aL  ++
  GSMUA_Achr6P26930_001 135 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRV 179
                            8999*********************************99998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-13131195IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.737133189IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.1E-12135189No hitNo description
SuperFamilySSF579597.74E-12135189No hitNo description
PfamPF001702.5E-10135185IPR004827Basic-leucine zipper domain
CDDcd147031.44E-23136186No hitNo description
PROSITE patternPS000360138153IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 253 aa     Download sequence    Send to blast
MAQLPPKIPS NMSPNWPNLG HHAIPPSFLP IAPPLAPGSQ PSWVDEFLDF SSAKRGNHRR  60
SLMSMFSDDV PPSSLSGAVP ASSSSTPSDH NSFNEDKPTD QKAKNESEEA QSACKEEPQA  120
VAQPATGTET IVDPKRVKRI LANRQSAQRS RVRKLQYISE LERSVTTLQT EVSALSPRVA  180
FLDHQRSLLT LGNSHLKQRI AALAQDKIFK DAHQEALKKE IERLRQVYHQ QNLKKMAPPT  240
SEPAVSTEKE LLS
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator. {ECO:0000269|PubMed:17719007}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009406251.11e-179PREDICTED: basic leucine zipper 61-like
SwissprotQ9M2K41e-89BZP61_ARATH; Basic leucine zipper 61
TrEMBLM0TAI80.0M0TAI8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P26930_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP132238125
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G58120.11e-84bZIP family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Gibalová A, et al.
    Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte.
    Plant Reprod, 2017. 30(1): p. 1-17
    [PMID:27896439]
  3. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]