PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P32000_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 377aa    MW: 39973.6 Da    PI: 9.8403
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P32000_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_167.42.4e-21241303163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elkrerrkq+NRe+ArrsR+RK+ae+eeL+ kv++L+a N+ L++e+++lk++++kl+ e+
  GSMUA_Achr6P32000_001 241 ERELKRERRKQSNRESARRSRLRKQAETEELALKVESLSADNTNLRSEISRLKENSDKLRLEN 303
                            89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077777.8E-23159IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165965.6E-898216No hitNo description
Gene3DG3DSA:1.20.5.1706.1E-15239300No hitNo description
SMARTSM003381.2E-19241305IPR004827Basic-leucine zipper domain
PfamPF001708.1E-20241303IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.208243306IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.38E-10244299No hitNo description
CDDcd147022.14E-20246297No hitNo description
PROSITE patternPS000360248263IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0005829Cellular Componentcytosol
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
GO:0044212Molecular Functiontranscription regulatory region DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 377 aa     Download sequence    Send to blast
MQAYFGAGMM PPPYFSTAVA PSHAPHPYMW GPQPLVPPFG SPYAAIYPHG GVYTHPSVPL  60
GSHTHCQGIS PSPATSEAVV LATPLSVEMP AKSSKHKDKS LVKKLKGLDG LALSGGNGII  120
EDRDQADGNS GYNSTEGSSD GSNGDNAEGG TKDQRRQRSE DGPSSDKAKV SERVKPGHTE  180
ETGTSSKAAA GVTGTPVITA KPVGTVLSSV PAPGMDIRVS SANKVKGIGT PVPLATGAVD  240
ERELKRERRK QSNRESARRS RLRKQAETEE LALKVESLSA DNTNLRSEIS RLKENSDKLR  300
LENSALTDKL KNVQSSHFGK MKSVRIPPLV AENFLSMIEN QNSARTAPQE GDTSDQSGGK  360
LHQLLNTSPR RDAVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1257263RRSRLRK
2257264RRSRLRKQ
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00318DAPTransfer from AT2G46270Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009406805.10.0PREDICTED: G-box-binding factor 3-like isoform X1
RefseqXP_009406806.10.0PREDICTED: G-box-binding factor 3-like isoform X1
TrEMBLM0TBZ50.0M0TBZ5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P32000_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G46270.12e-67G-box binding factor 3