PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr6P36230_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 175aa    MW: 20524.2 Da    PI: 9.4688
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr6P36230_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_139.41.3e-1282141463
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                             +r rr+++NRe+ArrsR RK+ ++ eL   v  L + N++L + l++   e ++l  e+
  GSMUA_Achr6P36230_001  82 ERRKRRMISNRESARRSRMRKQNQLSELWSLVVHLRSTNQKLLDDLNRVIREHDQLLHEN 141
                            689********************************************9999999988776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.2E-1179143IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.0E-980137No hitNo description
PROSITE profilePS5021710.70381144IPR004827Basic-leucine zipper domain
PfamPF001706.1E-1181141IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.03E-1083134No hitNo description
CDDcd147021.25E-1384135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 175 aa     Download sequence    Send to blast
MHRGEIASIR YLSPSDLPSF QTDYHMAHGD VPSFYFGNIF GCYSSNQVQS MPLQELSLSN  60
SGLNSHMVIV EAEEYQLNLA EERRKRRMIS NRESARRSRM RKQNQLSELW SLVVHLRSTN  120
QKLLDDLNRV IREHDQLLHE NAQLRDEETK LQNKLKNIQA EDKLCSAKSR RNLLR
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
195102RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009407232.11e-127PREDICTED: basic leucine zipper 43-like
TrEMBLM0TD661e-125M0TD66_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr6P36230_0011e-126(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.18e-27basic leucine-zipper 42