PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P00660_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 339aa    MW: 37728.5 Da    PI: 8.7362
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P00660_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like99.42.5e-31210265156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W++eLH+rFv a++qLGG+++AtPk+i+e mkv+gLt+++vkSHLQkYRl+
  GSMUA_Achr7P00660_001 210 KARRCWSQELHRRFVLAIQQLGGAQVATPKQIREQMKVDGLTNDEVKSHLQKYRLH 265
                            68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.876207267IPR017930Myb domain
SuperFamilySSF466892.15E-16208268IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.606.6E-28209268IPR009057Homeodomain-like
TIGRFAMsTIGR015572.8E-26210265IPR006447Myb domain, plants
PfamPF002491.2E-6212263IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 339 aa     Download sequence    Send to blast
MVGGFVKEAS AIGSGDGGRA ARLEESIKSL EEEKRKIEAF KRELPLCMLL LSEVIEGLNK  60
EIQRCRGDRF GCVFEEFIPM KSKVEEDGRV KAETDCKDKK NWMSSAQLWS DNHSDNDDDD  120
KAHANIISEE VKKKKRNLYG YHRNFFSECK NRNGGGAFVP FKRLSSFAAS SKEEEKPPPA  180
LPDLSLQSPA IENTPGLVTC AAEDHRPPRK ARRCWSQELH RRFVLAIQQL GGAQVATPKQ  240
IREQMKVDGL TNDEVKSHLQ KYRLHARRVH NASATADRPV VGEGLWIPQK QYAGSSRRSA  300
SRSGSPQSPL HLAASAHALS ITAGDSSEED GKSESCSWK
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408601.10.0PREDICTED: myb family transcription factor EFM
TrEMBLM0TDK60.0M0TDK6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P00660_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP55823353
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.11e-47G2-like family protein