PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr7P01750_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 336aa    MW: 37048.8 Da    PI: 7.9276
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr7P01750_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH32.81.2e-10219266455
                            HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
                    HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                            +h+  Er RR++i +++  L++l+P +    +k   Ka++L + ++YI+ Lq
  GSMUA_Achr7P01750_001 219 SHSLSERARREKISERMKILQDLVPGC----NKVIGKASVLDEIINYIQALQ 266
                            799***********************9....677*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF474596.02E-18213284IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.17E-10213270No hitNo description
Gene3DG3DSA:4.10.280.105.5E-18215283IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088816.075215265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000104.0E-8219266IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.6E-11221271IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    Send to blast
MTEIIGFRGR YMQVCPSRSP PISELKNPLP HFPKIHTAST VTSLLDHRRS DPLPLGAWNP  60
FVVDASLHSR PSLGMDPPSL MPRLPEMCRF PMLGMPPPEL VPRVGRIGGD ASVEESTVTE  120
QCGGSKGRRR RRDPPSSGGA TEDESSKFVS TSSGNELAEA EAKRLKAIKS TDGNDNIKSE  180
AEASSGICNK LAAQNPQTTE PPKQDYIHVR ARRGQATDSH SLSERARREK ISERMKILQD  240
LVPGCNKVIG KASVLDEIIN YIQALQHQVE FLSMKLEAVN SPMNTTIEVF PSKDFSSQRY  300
DTTSSLAYSS QTREYEQGSG TEWLHMQVGG AFERVT
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that forms a ternary complex with RSS3 and TIFY11A/JAZ9 to negatively regulate jasmonate-responsive genes. {ECO:0000269|PubMed:23715469}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009408467.10.0PREDICTED: transcription factor bHLH79 isoform X1
SwissprotQ69WS36e-88BH094_ORYSJ; Transcription factor BHLH094
TrEMBLM0TDW50.0M0TDW5_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr7P01750_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP30653577
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G59640.13e-67BIG PETAL P