PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr7P13230_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

BES1

Protein Properties

Length: 146aa MW: 17272.8 Da PI: 11.543

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr7P13230_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	132.3	5.6e-41	71	141	2	72
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkg 72 +s r pt +ErEnn++RE rRR +aa+iyaGLRa+Gny+lpk+aD+n+VlkALc+eAGw ve+DGt yrk GSMUA_Achr7P13230_001 71 TSDRWPTPRERENNRLREQRRRRVAARIYAGLRAHGNYQLPKHADQNDVLKALCEEAGWHVEEDGTIYRKV 141 57899****************************************************************85 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	5.6E-37	73	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 146 aa Download sequence Send to blast
MLLSCPQFHV SQRQSLSSLH DTQRRPRRAQ VVEEKKRMEE AMRVAKKSGC IKTTTGPWTV 60 RRRRRDGVVK TSDRWPTPRE RENNRLREQR RRRVAARIYA GLRAHGNYQL PKHADQNDVL 120 KALCEEAGWH VEEDGTIYRK VRIHLP

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	7e-19	24	140	314	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	7e-19	24	140	314	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	7e-19	24	140	314	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	7e-19	24	140	314	438	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009795965.1	3e-41	PREDICTED: uncharacterized protein LOC104242587
TrEMBL	M0TH60	1e-103	M0TH60_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr7P13230_001	1e-104	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP13201	30	32

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19350.6	2e-22	BES1 family protein