PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P00300_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 251aa    MW: 28895.7 Da    PI: 9.7405
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P00300_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP234.74.4e-11125166351
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                             +GV++  k+ +W A I++      +k+++lg+ g+ e+Aa+++++a+ 
  GSMUA_Achr8P00300_001 125 MRGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEDAARLYDRAAF 166
                            79**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.57100179IPR001471AP2/ERF domain
SuperFamilySSF541719.15E-8124169IPR016177DNA-binding domain
SMARTSM003801.4E-4124181IPR001471AP2/ERF domain
PfamPF008474.5E-5124167IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.105.5E-6127170IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 251 aa     Download sequence    Send to blast
MKLIKQHLIV TSEQSAMVSI RRRRYLGLCS GKSSFPVVLP RPIENGNAVE SPTQQVKPVS  60
VHPMRLVDTS LQKLVAKSET YPGSSSASGL ITSKEEPNHY YPGKEIKRRK RHRRKHYEDQ  120
EPCIMRGVYF KNMKWQAAIK VDKKQIHLGT VGSQEDAARL YDRAAFMCGR EPNFELTEEE  180
KQELRQYNWE EFLAMTRSAI NNKKHQRKLG ARRRNKSETQ ISNNWEKEDG TPASSMSEDD  240
EEDVDADTSV L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009412796.11e-178PREDICTED: ethylene-responsive transcription factor-like protein At4g13040 isoform X2
TrEMBLM0TLD20.0M0TLD2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P00300_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-46ERF family protein