PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P02020_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family MYB_related
Protein Properties Length: 38aa    MW: 4762.59 Da    PI: 10.4702
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P02020_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.31.5e-071337327
                           SS-HHHHHHHHHHHHHTTTT-HHHH CS
        Myb_DNA-binding  3 rWTteEdellvdavkqlGggtWktI 27
                           +WT eEd+l+  a +++ +g+W+ I
  GSMUA_Achr8P02020_001 13 PWTREEDKLFEWALAKYKKGDWRNI 37
                           8*********************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF466891.42E-6837IPR009057Homeodomain-like
Gene3DG3DSA:1.10.10.604.1E-61037IPR009057Homeodomain-like
PfamPF002491.2E-51337IPR001005SANT/Myb domain
CDDcd001674.96E-41337No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 38 aa     Download sequence    Send to blast
MFSRQFMGMV PRPWTREEDK LFEWALAKYK KGDWRNIL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
TrEMBLM0TLV47e-20M0TLV4_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P02020_0011e-20(Musa acuminata)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G58900.13e-08Homeodomain-like transcriptional regulator