PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr8P21560_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 238aa MW: 27080.5 Da PI: 9.9199

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr8P21560_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.9	1e-13	163	214	5	52
CHHHCHHHHHHHHHHHHHHHHH.....HHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKka.....eieeLeekvkeLeaeNkaLkkeleel 52 +r++r++kNRe+A rsR+RK+a ++ eLe+kv Le+eN++L++ el GSMUA_Achr8P21560_001 163 RRQKRMIKNRESAARSRARKQAssidaYTNELENKVSRLEEENQRLRQ-QREL 214 79****************964444489****************5.4445 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	4.8E-13	154	214	No hit	No description
SMART	SM00338	1.9E-8	159	236	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	7.2E-11	163	211	IPR004827	Basic-leucine zipper domain
CDD	cd14707	3.28E-18	163	217	No hit	No description
SuperFamily	SSF57959	1.04E-8	163	213	No hit	No description
PROSITE pattern	PS00036	0	166	181	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 238 aa Download sequence Send to blast
MGTTMATQGV GGRQQSQVQS LARQGSIYSL TLNEVQSHLG EPLHSMNLDE LLRSVFPSEE 60 HHVTMPRVLS KKTIDEVWRH IQQGQKEAEE GVRDYGRQST LGEMTLEAFL SKAGIVTELP 120 QPLAIVDAVY HEGEGANSSP FNPQTPRRKR GPVEDMAKKT VERRQKRMIK NRESAARSRA 180 RKQASSIDAY TNELENKVSR LEEENQRLRQ QRELEAMIHH IPQPEPKHQL RRTSSALF

Functional Description ? help Back to Top
Source	Description
UniProt	Binds to the embryo specification element and the ABA-responsive element (ABRE) of the Dc3 gene promoter. Could participate in abscisic acid-regulated gene expression during seed development.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009414226.1	1e-153	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_009414227.1	1e-153	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_009414229.1	1e-153	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_018685452.1	1e-153	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Refseq	XP_018685453.1	1e-153	PREDICTED: ABSCISIC ACID-INSENSITIVE 5-like protein 2
Swissprot	Q9LES3	5e-61	AI5L2_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 2
TrEMBL	M0TSF9	1e-174	M0TSF9_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr8P21560_001	1e-175	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP4441	33	67

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G41070.3	3e-41	bZIP family protein

Publications ? help Back to Top
Kim H, et al. ABA-HYPERSENSITIVE BTB/POZ PROTEIN 1 functions as a negative regulator in ABA-mediated inhibition of germination in Arabidopsis. Plant Mol. Biol., 2016. 90(3): p. 303-15 [PMID:26667153] Song C,Kim T,Chung WS,Lim CO The Arabidopsis Phytocystatin AtCYS5 Enhances Seed Germination and Seedling Growth under Heat Stress Conditions. Mol. Cells, 2017. 40(8): p. 577-586 [PMID:28756655]