PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr8P23510_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 161aa    MW: 18296.7 Da    PI: 10.1822
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr8P23510_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_130.67.5e-1082140462
                            XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 
                             ++ rr+ +NRe+ArrsR RK++++ eL+  v  L++  ++L ++l++   + ++  se
  GSMUA_Achr8P23510_001  82 ERKKRRMKSNRESARRSRMRKQKQLSELRSQVMYLQSVHRRLLDQLNRVMRQRDEINSE 140
                            5789999*****************************************99999888776 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-1179143IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.381144IPR004827Basic-leucine zipper domain
PfamPF001708.8E-782140IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-883157No hitNo description
SuperFamilySSF579592.41E-983132No hitNo description
CDDcd147024.70E-1384135No hitNo description
PROSITE patternPS00036086101IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 161 aa     Download sequence    Send to blast
MQQGEVASIH YLSPSNPLSS PAHYGMPQNC VTSFGCGSLF GPRLAQLQAV PMMHDLGLPS  60
SCFGSGATSD EAGDHQASLA EERKKRRMKS NRESARRSRM RKQKQLSELR SQVMYLQSVH  120
RRLLDQLNRV MRQRDEINSE IEKLRDENTE LRRKLENLAA N
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
182103RKKRRMKSNRESARRSRMRKQK
28388KKRRMK
395102RRSRMRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009414018.11e-116PREDICTED: basic leucine zipper 43-like
TrEMBLM0TT041e-115M0TT04_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr8P23510_0011e-115(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP118635126
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G15830.14e-23basic leucine-zipper 3