PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr8P31150_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

BES1

Protein Properties

Length: 295aa MW: 32067 Da PI: 9.4938

Description

BES1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr8P31150_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF822	201	3.8e-62	4	142	2	145
DUF822 2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpl.eeaeaagssasa 88 g+gr ptwkErEnnkrRERrRRaiaaki++GLR Gnyklpk++DnneVlkALcreAGw vedDGttyrkg++p+ ea+a+g s+++ GSMUA_Achr8P31150_001 4 GGGRLPTWKERENNKRRERRRRAIAAKIFTGLRTLGNYKLPKHCDNNEVLKALCREAGWEVEDDGTTYRKGFHPPpPEAAAGGLSTNI 91 89***********************************************************************8888999999999 PP DUF822 89 spesslqsslkssalaspvesysaspksssfpspssldsislasa..asllpvlsvlsl 145 sp ss+ +spv+sy+asp+sssfpsps+ld+ + +s ++llp+l++ls+ GSMUA_Achr8P31150_001 92 SPLSSSF--------PSPVPSYHASPSSSSFPSPSRLDNSNDHSVrpSCLLPFLRNLST 142 9999955........*********************998877677999999999987 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Pfam	PF05687	2.2E-59	4	141	IPR008540	BES1/BZR1 plant transcription factor, N-terminal

Sequence ? help Back to Top
Protein Sequence Length: 295 aa Download sequence Send to blast
MTSGGGRLPT WKERENNKRR ERRRRAIAAK IFTGLRTLGN YKLPKHCDNN EVLKALCREA 60 GWEVEDDGTT YRKGFHPPPP EAAAGGLSTN ISPLSSSFPS PVPSYHASPS SSSFPSPSRL 120 DNSNDHSVRP SCLLPFLRNL STLPPLRISN SAPITPPISS PTASRPPKIR KPDWDYSSFP 180 HALFAASAPA SPTRGCHHGR QPSTIPECDE SDASSVGSGR RINFQMTAPA SPTYNLVNPG 240 AMSSFPGGEV LEKGRGGMEF DFESGRVKAW EGERIHDVGL DELELTLRLG IMAPK

3D Structure ? help Back to Top

PDB ID	Evalue	Query Start	Query End	Hit Start	Hit End	Description
5zd4_A	5e-23	7	83	372	448	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B	5e-23	7	83	372	448	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C	5e-23	7	83	372	448	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D	5e-23	7	83	372	448	Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
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Functional Description ? help Back to Top
Source	Description
UniProt	Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid biosynthetic genes. May act as transcriptional repressor by binding the brassinosteroid-response element (5'-CGTGCG-3') in the promoter of GRAS32 (AC Q9LWU9), another positive regulator of brassinosteroid signaling (By similarity). {ECO:0000250}.
UniProt	Positive brassinosteroid-signaling protein. Mediates downstream brassinosteroid-regulated growth response and feedback inhibition of brassinosteroid (BR) biosynthetic genes (PubMed:17699623, PubMed:19220793). May act as transcriptional repressor by binding the brassinosteroid-response element (BREE) (5'-CGTG(T/C)G-3') in the promoter of DLT (AC Q9LWU9), another positive regulator of BR signaling (PubMed:19220793). Acts as transcriptional repressor of LIC, a negative regulator of BR signaling, by binding to the BRRE element of its promoter. BZR1 and LIC play opposite roles in BR signaling and regulation of leaf bending (PubMed:22570626). {ECO:0000269\|PubMed:17699623, ECO:0000269\|PubMed:19220793, ECO:0000269\|PubMed:22570626}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by 24-epibrassinolide. {ECO:0000269\|PubMed:22570626}.

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009414760.1	0.0	PREDICTED: protein BZR1 homolog 1-like
Swissprot	B8B7S5	1e-105	BZR1_ORYSI; Protein BZR1 homolog 1
Swissprot	Q7XI96	1e-105	BZR1_ORYSJ; Protein BZR1 homolog 1
TrEMBL	M0TV67	0.0	M0TV67_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr8P31150_001	0.0	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP5474	34	53

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75080.2	3e-57	BES1 family protein

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] Tong H, et al. DWARF AND LOW-TILLERING acts as a direct downstream target of a GSK3/SHAGGY-like kinase to mediate brassinosteroid responses in rice. Plant Cell, 2012. 24(6): p. 2562-77 [PMID:22685166]