PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P01590_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 231aa    MW: 26440.7 Da    PI: 9.1921
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P01590_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP235.23.1e-11105146351
                    AP2   3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaark 51 
                             +GV++  k+ +W A I++      +k+++lg+ g+ eeAa+++++a+ 
  GSMUA_Achr9P01590_001 105 MTGVYF--KNMKWQAAIKVD-----KKQIHLGTVGSQEEAARLYDRAAF 146
                            68**98..47*********4.....5********************985 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS510328.76883159IPR001471AP2/ERF domain
PfamPF008472.0E-5105147IPR001471AP2/ERF domain
SuperFamilySSF541711.05E-7106149IPR016177DNA-binding domain
SMARTSM003805.3E-4111161IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.106.7E-6112151IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 231 aa     Download sequence    Send to blast
MVSLRRRRYL GLCSGKSSFP VVLPKLIENG NAVDNSNQHV KPVSVHPMPS TESSLQKLVK  60
ESICPGSSST FGSSTTKEEP NNNFPGKRRK RHRRKHYEDQ EPCIMTGVYF KNMKWQAAIK  120
VDKKQIHLGT VGSQEEAARL YDRAAFMCGR EPNFELSEEE KQELRQYNWD EFLEKTRSAI  180
NDKKHQRKLT VGRRKKSETH MPNSNWEHEG GTPVSSMSDD DEDVDANTCV L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009415936.11e-175PREDICTED: ethylene-responsive transcription factor-like protein At4g13040
TrEMBLM0TWL61e-174M0TWL6_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P01590_0011e-175(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP75163545
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G13040.14e-44ERF family protein