PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P01710_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 307aa    MW: 33894.5 Da    PI: 7.898
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P01710_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like1101.2e-343286155
                G2-like  1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
                           kprlrWtpeLH+rFv+av+qLGG++kAtPkti+++m vkgLtl+h+kSHLQkYRl
  GSMUA_Achr9P01710_001 32 KPRLRWTPELHDRFVDAVTQLGGPDKATPKTIMKTMAVKGLTLYHLKSHLQKYRL 86
                           79****************************************************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129412.5122989IPR017930Myb domain
Gene3DG3DSA:1.10.10.604.8E-333087IPR009057Homeodomain-like
SuperFamilySSF466891.97E-173288IPR009057Homeodomain-like
TIGRFAMsTIGR015571.5E-243287IPR006447Myb domain, plants
PfamPF002495.0E-83485IPR001005SANT/Myb domain
PfamPF143798.5E-10181205IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0010628Biological Processpositive regulation of gene expression
GO:0016036Biological Processcellular response to phosphate starvation
GO:0005634Cellular Componentnucleus
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 307 aa     Download sequence    Send to blast
MYATKRGEEF HGSLEGANLP GDTCHLFSSD PKPRLRWTPE LHDRFVDAVT QLGGPDKATP  60
KTIMKTMAVK GLTLYHLKSH LQKYRLGKQS NKEPSDNSKD AANFVESQGT GPLSSSPLSS  120
SKLLAKDLID GCDEAMRVQM ELERQLHEHL EAFLLAFPES FSSSSYLPFL NSFFFITLHQ  180
VQRHLQIRIE AHGKYLHSMF ERACNIIDPN LASNGLALVR KTPSQFPTSE AADDRLSFLC  240
KALKLPSLSE IAMESVQRKP SNGVSATFAE CSVDSCLTST ASPGTGRSKM LGPREAAVDI  300
RFSYVGN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6j4k_A5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j4k_B5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_A5e-213288157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_B5e-213288157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_C5e-213288157Protein PHOSPHATE STARVATION RESPONSE 1
6j4r_D5e-213288157Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_A5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_C5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_D5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_F5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_H5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
6j5b_J5e-213288258Protein PHOSPHATE STARVATION RESPONSE 1
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00378DAPTransfer from AT3G24120Download
Motif logo
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009415953.10.0PREDICTED: protein PHR1-LIKE 2-like
TrEMBLM0TWM80.0M0TWM8_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P01710_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP2941144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24120.22e-75G2-like family protein