PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr9P02570_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 102aa MW: 12118 Da PI: 11.2895

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr9P02570_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	24.4	6.1e-08	33	95	1	63
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 eke +r r NRe+Ar +R++a +eL+++v+ L+ +N+ +k e + ke+ +lk + GSMUA_Achr9P02570_001 33 EKEERRLPRVLANRESARQTILRRQALRKELKRRVADLSLQNENMKMEKDLAAKEYLSLKGAN 95 677888889999***********************************************9876 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
Gene3D	G3DSA:1.20.5.170	2.3E-4	29	93	No hit	No description
SMART	SM00338	1.7E-6	33	97	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	8.898	35	98	IPR004827	Basic-leucine zipper domain
SuperFamily	SSF57959	6.27E-6	37	92	No hit	No description

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 102 aa Download sequence Send to blast
MKWKNEHRSN KILNRLHQGS SFPVITLSRM QAEKEERRLP RVLANRESAR QTILRRQALR 60 KELKRRVADL SLQNENMKME KDLAAKEYLS LKGANEHLKE QV

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_018673635.1	6e-40	PREDICTED: uncharacterized protein LOC108951230
TrEMBL	M0TWW4	3e-66	M0TWW4_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr9P02570_001	5e-67	(Musa acuminata)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP3165	34	75

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G19490.1	5e-19	bZIP family protein