PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P05310_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 416aa    MW: 44280.1 Da    PI: 7.7739
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P05310_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_169.36.3e-22279341163
                            XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                            e+elk+errkq+NRe+ArrsR+RK+ae+eeL  kv++L+aeN++L++e++ l k+++kl+ e+
  GSMUA_Achr9P05310_001 279 ERELKKERRKQSNRESARRSRLRKQAETEELSAKVETLSAENTSLRSEINCLMKNSDKLRLEN 341
                            89*********************************************************9887 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.3E-28189IPR012900G-box binding protein, multifunctional mosaic region
Gene3DG3DSA:1.20.5.1701.6E-15276338No hitNo description
PfamPF001702.6E-20279341IPR004827Basic-leucine zipper domain
SMARTSM003381.2E-20279343IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.105281344IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.63E-11282337No hitNo description
CDDcd147023.55E-21284335No hitNo description
PROSITE patternPS000360286301IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 416 aa     Download sequence    Send to blast
MASNEAATPP KSNKASSPVQ SRETPANPPY ADWATMQAYY GHGMIPPTYL SGHVPHPYMW  60
GPQPLIPPFG SPYTAIYPLG GVYSHASVPL SSHTHCQGIA PSPSPAASEA VVMATPLSVE  120
MPAKSPRNKD RRLVKKLKGL DGLALSGGNG STENRDQADG NSEYNSTEGS SYGSDGDNAE  180
GGIKDQRKRR SEDVPSSDNA TNSEQVNPGH TEETATSSKP AAGVTGAAAI TAKPVGNIPS  240
SVPAAGMDIR VSNASKMKAI GLPVPVATGA VFPSHNGDER ELKKERRKQS NRESARRSRL  300
RKQAETEELS AKVETLSAEN TSLRSEINCL MKNSDKLRLE NSALMEELNN VQSDHVGNTM  360
GVRIRPAVAE NFLSMIENQS SISRMTQQDG DSSDQSSGKL HQLLNNSPRR DAVAAS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1185190QRKRRS
2295301RRSRLRK
3295302RRSRLRKQ
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009416392.10.0PREDICTED: G-box-binding factor 3-like
RefseqXP_009416394.10.0PREDICTED: G-box-binding factor 3-like
RefseqXP_009416395.10.0PREDICTED: G-box-binding factor 3-like
TrEMBLM0TXP00.0M0TXP0_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P05310_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27763888
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01120.14e-58G-box binding factor 2