PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr9P09280_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

bZIP

Protein Properties

Length: 93aa MW: 10922.5 Da PI: 9.6858

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr9P09280_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	42.6	1.4e-13	11	65	6	60
HHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 6 rerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklk 60 rerrkq NRe+ArrsR RK++e e ++ +++L++eN+ Lk ++e l k ++ l+ GSMUA_Achr9P09280_001 11 RERRKQANRESARRSRIRKRQEYEDSARMMAVLKNENDVLKAKNEILMKRIKDLE 65 8************************************************999886 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	6.8E-8	6	70	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	7.0E-11	7	65	No hit	No description
PROSITE profile	PS50217	10.289	8	65	IPR004827	Basic-leucine zipper domain
CDD	cd14702	1.75E-11	11	60	No hit	No description
SuperFamily	SSF57959	9.85E-8	11	64	No hit	No description
Pfam	PF00170	6.6E-11	11	65	IPR004827	Basic-leucine zipper domain
PROSITE pattern	PS00036	0	13	28	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 93 aa Download sequence Send to blast
MEGLLDDDEF RERRKQANRE SARRSRIRKR QEYEDSARMM AVLKNENDVL KAKNEILMKR 60 IKDLEAGSIR IMEILSGLYW PADTLDALGI RPS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_009416840.1	4e-56	PREDICTED: DNA-binding protein EMBP-1-like isoform X1
TrEMBL	M0TYT7	5e-59	M0TYT7_MUSAM; Uncharacterized protein
STRING	GSMUA_Achr9P09280_001	8e-60	(Musa acuminata)