PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P09630_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 334aa    MW: 37225.3 Da    PI: 8.1532
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P09630_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like96.81.6e-30192247156
                G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRla 56 
                            k+r++W+peLH+rFv a++qLGG  +AtPk+i+elmkv+gLt+++vkSH+QkYRl+
  GSMUA_Achr9P09630_001 192 KARRCWSPELHRRFVLALHQLGGVRVATPKQIRELMKVDGLTNDEVKSHMQKYRLH 247
                            68****************************************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129414.505189249IPR017930Myb domain
Gene3DG3DSA:1.10.10.609.0E-28190250IPR009057Homeodomain-like
SuperFamilySSF466892.33E-16190250IPR009057Homeodomain-like
TIGRFAMsTIGR015571.1E-24192247IPR006447Myb domain, plants
PfamPF002494.7E-6194245IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 334 aa     Download sequence    Send to blast
MAGIGLELRL CASRTVGGFV KQAAAVVETT DRGVAKLEES VRSLEEERRK IDAFKRELPL  60
CMLLLTDVIE GLKKELERCR GQKLANAFEE FIPIRRKCEE EAGVKLEADY EDKKNWMSSA  120
QLWGVNSSEN NDEDDKSITD ERNGRPDCDA GKESLNLESK NRSAGGAFVQ FKGISALAMK  180
PKEEVLQQAP RKARRCWSPE LHRRFVLALH QLGGVRVATP KQIRELMKVD GLTNDEVKSH  240
MQKYRLHSRK LPNASASFSR PPMVLGGLWV PPENHTVSPQ QSDSQSGSRQ SSLRLAGCDG  300
TISAAAGDSC EEEGNLLSTM LHFPWNNKLC RFST
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a flowering repressor, directly repressing FT expression in a dosage-dependent manner in the leaf vasculature. {ECO:0000269|PubMed:25132385}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by SVP. Down-regulated by high temperature and gibberellic acid treatment. Not regulated by photoperiod, circadian rhythm under long days or vernalization. {ECO:0000269|PubMed:25132385}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAC1867481e-110AC186748.1 Musa acuminata clone MA4_8L21, complete sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009416801.10.0PREDICTED: myb family transcription factor EFM-like
SwissprotQ9ZQ855e-59EFM_ARATH; Myb family transcription factor EFM
TrEMBLM0TYX20.0M0TYX2_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P09630_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP181737107
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G03500.12e-56G2-like family protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]