PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

GSMUA_Achr9P13840_001

Organism

Musa acuminata

Taxonomic ID

4641

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa

Family

WRKY

Protein Properties

Length: 26aa MW: 3035.51 Da PI: 10.2526

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
GSMUA_Achr9P13840_001	genome	CIRAD	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	31.2	4.5e-10	7	25	3	21
-SS-EEEEEEE--TT-SS- CS WRKY 3 DgynWrKYGqKevkgsefp 21 gy+WrKYG+K++kgs +p GSMUA_Achr9P13840_001 7 EGYSWRKYGRKPIKGSAYP 25 79***************99 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
PROSITE profile	PS50811	10.223	1	26	IPR003657	WRKY domain
SuperFamily	SSF118290	1.57E-7	3	25	IPR003657	WRKY domain
Gene3D	G3DSA:2.20.25.80	5.1E-8	4	25	IPR003657	WRKY domain
Pfam	PF03106	4.3E-6	7	25	IPR003657	WRKY domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 26 aa Download sequence Send to blast
MIYIPSEGYS WRKYGRKPIK GSAYPS

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G30590.1	3e-08	WRKY DNA-binding protein 21