PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P14360_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family ERF
Protein Properties Length: 192aa    MW: 21100.6 Da    PI: 5.3161
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P14360_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-181564255
                    AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                           +ykGVr +k +grWv+eIr p++   rkr++lg+++++e+Aa+a +aa  +l+g
  GSMUA_Achr9P14360_001 15 RYKGVRLRK-WGRWVSEIRLPNS---RKRIWLGSYDSPEKAARAFDAATACLRG 64
                           7******99.**********933...5**********************99998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.7E-111564IPR001471AP2/ERF domain
PROSITE profilePS5103221.6011572IPR001471AP2/ERF domain
CDDcd000185.07E-201574No hitNo description
SMARTSM003804.5E-331578IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.107.3E-281573IPR001471AP2/ERF domain
SuperFamilySSF541711.11E-201572IPR016177DNA-binding domain
PRINTSPR003671.9E-81627IPR001471AP2/ERF domain
PRINTSPR003671.9E-83854IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 192 aa     Download sequence    Send to blast
MTEREGGVPA AGERRYKGVR LRKWGRWVSE IRLPNSRKRI WLGSYDSPEK AARAFDAATA  60
CLRGRLARLN FPETPPPRTA QRLTHLQIQA AAARHAASAS TPPQLWHPRA ASSPSEDASD  120
GFTAGSEDTL DWSFMDSQEA AAALAGAGEF PDLMDDFMCD FFSPVQMTAP LAEVVEDQCP  180
IDLGSNSFLW SF
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A4e-13573373Ethylene-responsive transcription factor ERF096
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009417541.11e-139PREDICTED: ethylene-responsive transcription factor ERF017-like
TrEMBLM0U0941e-137M0U094_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P14360_0011e-138(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP86132144
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G19210.12e-33ERF family protein