PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P17080_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family EIL
Protein Properties Length: 622aa    MW: 70346.2 Da    PI: 6.3711
Description EIL family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P17080_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1EIN3510.11.1e-155654431354
                            XXXXXXXXXXXXXXXXXXXXXXX..XXXXX....XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX CS
                   EIN3   1 eelkkrmwkdqmllkrlkerkkqlledkeaa...tgakksnksneqarrkkmsraQDgiLkYMlkemevcnaqGfvYgiipekgkpve 85 
                            eel++r w+d+m+lk+lke+++q+  +k+++    +++k++++++qa rkkmsraQDgiLkYMlk+mevcnaqGfvYgiipekgkpv+
  GSMUA_Achr9P17080_001  65 EELEHRLWRDRMRLKHLKEQQQQQSRSKSKNkeqGDSAKQRQCHDQALRKKMSRAQDGILKYMLKMMEVCNAQGFVYGIIPEKGKPVS 152
                            8*********************9887777666679999************************************************** PP

                            XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX....XX----STTS-HHHHHHHHHHHSSSSSS-TTS--TTT--HHHH- CS
                   EIN3  86 gasdsLraWWkekvefdrngpaaiskyqaknlilsgesslqtersseshslselqDTtlgSLLsalmqhcdppqrrfplekgvepPWW 173
                            gasd+Lr+WWkekv+fdrngp+ai+kyq +n+i++++s++++ ++++ hsl+elqDTtlgSLLsalmqhcdppqrrfplekgv+pPWW
  GSMUA_Achr9P17080_001 153 GASDNLRGWWKEKVRFDRNGPVAIAKYQVDNAIVGSNSEMSS-GTASLHSLQELQDTTLGSLLSALMQHCDPPQRRFPLEKGVAPPWW 239
                            ***********************************9999976.********************************************* PP

                            --S--HHHHHHT--TT--.-----GGG--HHHHHHHHHHHHHHTGGGHHHHHHTTTTSSSSTTT--SHHHHHHHHHHTTTTT-S--XX CS
                   EIN3 174 PtGkelwwgelglskdqgtppykkphdlkkawkvsvLtavikhmsptieeirelerqskylqdkmsakesfallsvlnqeekecatvs 261
                            PtGke+ww++lg+++dq++ppykkphdlkkawkvsvLt+vikhmsp+i++ir+l+rqsk+lqdkm+akes+++l+v++qee+++ +++
  GSMUA_Achr9P17080_001 240 PTGKEEWWPQLGIPNDQRPPPYKKPHDLKKAWKVSVLTCVIKHMSPDINKIRRLVRQSKCLQDKMTAKESATWLAVIKQEEDMYMKLH 327
                            **************************************************************************************** PP

                            XX...XX...XXXXXXXXXXXXXXXXXXXXXXXXXX.XXXXXXXXXX.....................XXXXXXXXXXXXXXXXXXXX CS
                   EIN3 262 ah...ss...slrkqspkvtlsceqkedvegkkeskikhvqavktta.....................gfpvvrkrkkkpsesakvss 322
                            ++   ++   s+ ++s +++ sc+ ++d eg +e k ++v ++k +a                     +++++rkr  + +e+++v +
  GSMUA_Achr9P17080_001 328 PEayfPPssgSCISGSISFVSSCS-EYDAEGVDEGKCEDVVNHKLHAegnpfdlsgtarkektvkeemNMEFTRKR--NVAEPESVLN 412
                            **887224568888*********9.99***999999999999999889******************6666666666..59******99 PP

                            X......XXXXXXX.XXXXXXXXXXXXXXXXX CS
                   EIN3 323 kevsrtcqssqfrgsetelifadknsisqney 354
                            +  ++tc++ q+++++++++f d+n++++++y
  GSMUA_Achr9P17080_001 413 QC-IYTCDNVQCPHHDPRHGFLDRNARNSHRY 443
                            96.5*************************987 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF048732.8E-13065320No hitNo description
Gene3DG3DSA:1.10.3180.105.6E-74194329IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
SuperFamilySSF1167683.79E-61199324IPR023278Ethylene insensitive 3-like protein, DNA-binding domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0005634Cellular Componentnucleus
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 622 aa     Download sequence    Send to blast
MMGGLLMEGM VYPGEPNYVQ NISYGSLHQP LVGECNGQGH LIDPPQDNFA EVCDEESDDE  60
DVDIEELEHR LWRDRMRLKH LKEQQQQQSR SKSKNKEQGD SAKQRQCHDQ ALRKKMSRAQ  120
DGILKYMLKM MEVCNAQGFV YGIIPEKGKP VSGASDNLRG WWKEKVRFDR NGPVAIAKYQ  180
VDNAIVGSNS EMSSGTASLH SLQELQDTTL GSLLSALMQH CDPPQRRFPL EKGVAPPWWP  240
TGKEEWWPQL GIPNDQRPPP YKKPHDLKKA WKVSVLTCVI KHMSPDINKI RRLVRQSKCL  300
QDKMTAKESA TWLAVIKQEE DMYMKLHPEA YFPPSSGSCI SGSISFVSSC SEYDAEGVDE  360
GKCEDVVNHK LHAEGNPFDL SGTARKEKTV KEEMNMEFTR KRNVAEPESV LNQCIYTCDN  420
VQCPHHDPRH GFLDRNARNS HRYVCKYQGT GVAFNSFPVK ENKLLSFSMS YDTQPNPTSL  480
ESGPIPANTS DLGIPSDGQR SIDELMSLYD KNLNANKSFN SRGIGMSEGR TPLQPRTRVE  540
DNFFPQGTKA IGGMLEEVSN LVQQQQQFPV RENVMPFQQQ FGNPSDEMSG DLCYGSAFSM  600
PSMDYSDALH RLQKAEAANW FY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
4zds_A9e-742003304134Protein ETHYLENE INSENSITIVE 3
4zds_B9e-742003304134Protein ETHYLENE INSENSITIVE 3
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor acting as a positive regulator in the ethylene response pathway (PubMed:16786297, PubMed:28829777, PubMed:27701783, PubMed:25995326). Required for the inhibition of root growth by ethylene in etiolated seedlings (PubMed:25995326, PubMed:28829777). Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression (PubMed:28829777). Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae) (PubMed:27701783). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal infection (PubMed:27701783). May enhance disease resistance by facilitating reactive oxygen species (ROS) generation and jasmonate biosynthesis with subsequent phytoalexin accumulation during Magnaporthe oryzae infection (PubMed:27701783). Acts as negative regulator of salt tolerance (PubMed:25995326). During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity (PubMed:25995326). Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling (PubMed:30002253). Possesses transactivation activity in protoplasts (PubMed:25995326). {ECO:0000269|PubMed:16786297, ECO:0000269|PubMed:25995326, ECO:0000269|PubMed:27701783, ECO:0000269|PubMed:28829777, ECO:0000269|PubMed:30002253}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by infection with the fungal pathogen Magnaporthe oryzae. {ECO:0000269|PubMed:27701783}.
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAB2663210.0AB266321.1 Musa acuminata AAA Group MA-EIL4 mRNA for ethylene signal transcription factor, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009417872.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
RefseqXP_009417873.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
RefseqXP_018673849.10.0PREDICTED: ETHYLENE INSENSITIVE 3-like 1 protein
SwissprotQ10M410.0EIL1A_ORYSJ; Protein ETHYLENE-INSENSITIVE 3-like 1a
TrEMBLM0U1150.0M0U115_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P17080_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63838168
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G27050.11e-162ETHYLENE-INSENSITIVE3-like 1
Publications ? help Back to Top
  1. Kikuchi S, et al.
    Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice.
    Science, 2003. 301(5631): p. 376-9
    [PMID:12869764]
  2. Yang C, et al.
    MAOHUZI6/ETHYLENE INSENSITIVE3-LIKE1 and ETHYLENE INSENSITIVE3-LIKE2 Regulate Ethylene Response of Roots and Coleoptiles and Negatively Affect Salt Tolerance in Rice.
    Plant Physiol., 2015. 169(1): p. 148-65
    [PMID:25995326]
  3. Yang C, et al.
    Activation of ethylene signaling pathways enhances disease resistance by regulating ROS and phytoalexin production in rice.
    Plant J., 2017. 89(2): p. 338-353
    [PMID:27701783]
  4. Qin H, et al.
    The activation of OsEIL1 on YUC8 transcription and auxin biosynthesis is required for ethylene-inhibited root elongation in rice early seedling development.
    PLoS Genet., 2017. 13(8): p. e1006955
    [PMID:28829777]
  5. Kuroha T, et al.
    Ethylene-gibberellin signaling underlies adaptation of rice to periodic flooding.
    Science, 2018. 361(6398): p. 181-186
    [PMID:30002253]