PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P20200_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 547aa    MW: 62330.8 Da    PI: 9.9776
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P20200_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_1331.3e-10265300742
                            HHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   7 errkqkNReAArrsRqRKkaeieeLeekvkeLeaeN 42 
                             rr+++NReAAr+sR+RKka+i++Le    +L++  
  GSMUA_Achr9P20200_001 265 LRRLAQNREAARKSRLRKKAYIQQLESSRNKLSQLE 300
                            69************************9877777654 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS502178.726261305IPR004827Basic-leucine zipper domain
SMARTSM003380.0042262312IPR004827Basic-leucine zipper domain
SuperFamilySSF579592.88E-7265306No hitNo description
PfamPF001701.1E-7265300IPR004827Basic-leucine zipper domain
PROSITE patternPS000360266281IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.4E-9266309No hitNo description
PfamPF141441.9E-30347421IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 547 aa     Download sequence    Send to blast
MTIWSTYKSV NPPLGSGHLW PWRSRWSVGS NFQLVHGVPC LRGIVRLGGH FTNLPPVLSV  60
SKQPDSRLSS LHVFGKTATI AGSSRLILRT PGRGRVREKK RGRRIGFLIP FWRRREMANE  120
RNKEAGAYDL GELDQALFFS LDEQDHSISG QEQRRDCLDS FRKKTLNIFP SQPMHVQTST  180
KGGKSLASPA TSGSKKSSDQ TMELGNSPND LPELPEKSSK DTKGPRQQIL KRVHLKLPIY  240
ILPLYPLQIK VLSNCVFCFL CEQTLRRLAQ NREAARKSRL RKKAYIQQLE SSRNKLSQLE  300
QEIQRARGQV TITLLEDQGL PTFAGGLNAA VFDMEYTRWL EEHHRLMCEL RAAVEEQQPE  360
NKLQMFVDSC LAHYDHMAYL KSIVTKSDVF HLISGVWMTP AERCFMWMGG FRPSELIKML  420
SRHIEPLTEQ QILGVCGLQQ STQETEEALS QGLEALNLSL SDTITSDALS CLSHMDNYMG  480
QMAVAVNKLA TLEGFIRQAD NLRQHTLHRL YQILTTRQMA RCLLAIAEYF HRLRALSSLW  540
LARPRHE
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009418242.10.0PREDICTED: transcription factor TGA2.1-like isoform X1
RefseqXP_009418243.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X3
RefseqXP_009418244.10.0PREDICTED: transcription factor TGA2.1-like isoform X4
RefseqXP_018686574.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X2
SwissprotQ52MZ21e-176TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLM0U1X90.0M0U1X9_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P20200_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-137bZIP family protein