PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_Achr9P27700_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 375aa    MW: 42295.4 Da    PI: 8.6917
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_Achr9P27700_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_135.81.8e-1189130546
                            CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                 bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46 
                            k  rr+++NReAAr+sR+RKka+i++Le    +L++  ++L+
  GSMUA_Achr9P27700_001  89 KTSRRLAQNREAARKSRLRKKAYIQQLESSRIKLSQLEQELQ 130
                            778*************************98877777776665 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1706.0E-885132No hitNo description
SMARTSM003382.7E-885148IPR004827Basic-leucine zipper domain
PROSITE profilePS502179.38187131IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.13E-788132No hitNo description
PfamPF001701.1E-889131IPR004827Basic-leucine zipper domain
PROSITE patternPS00036092107IPR004827Basic-leucine zipper domain
PfamPF141447.8E-32175249IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 375 aa     Download sequence    Send to blast
MYADTLNIFP SRPMHVDPRT KGGISSASPA SSGGSKPSEQ AMDLGNAESY LPALPEHGED  60
TKAAILKKEG NRKGISGSDH RRLKTPDPKT SRRLAQNREA ARKSRLRKKA YIQQLESSRI  120
KLSQLEQELQ KARAQGILFG GGAALVDAGV GGFNSDEATF DMEYARWVEE HHRLMCELRR  180
AVQEQSPETE LRMLVDICLA HYDQMMHLKG AVIKSDVFHL ISGMWMTPAE RCFMWMGGFR  240
PSELIKMLLR HIEPLTEQQI LGVCGMQQST QETEEALSQG LEALNKSLSD TIASDELSYT  300
SNMANYMGQM TVAMNKLTTL ESFVREADHL RQQALHRLYQ ILTTRQMARC LLAIAEYFHR  360
LRSLSSLWLS RPRLQ
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009419169.10.0PREDICTED: transcription factor HBP-1b(c38)-like isoform X1
SwissprotQ52MZ20.0TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLM0U4270.0M0U427_MUSAM; Uncharacterized protein
STRINGGSMUA_Achr9P27700_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.31e-143bZIP family protein