PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP01300_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family NAC
Protein Properties Length: 88aa    MW: 10099.8 Da    PI: 4.7587
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP01300_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM59.89.1e-19351149
                            NAM  1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk 49
                                   lppGfrF+Ptd elv++yL++k++g+  +++evi+e+di+k+ePwdLp 
  GSMUA_AchrUn_randomP01300_001  3 LPPGFRFRPTDAELVNHYLEEKIAGRIKSADEVISEIDICKSEPWDLPG 51
                                   79****************************99***************94 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019414.84E-17253IPR003441NAC domain
PROSITE profilePS5100518.174388IPR003441NAC domain
PfamPF023657.0E-9469IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 88 aa     Download sequence    Send to blast
MELPPGFRFR PTDAELVNHY LEEKIAGRIK SADEVISEID ICKSEPWDLP GDLPAPKSYL  60
LPLLHCLIHL FVCDLWSVFV FPIFFGKN
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator activated by proteolytic cleavage through regulated intramembrane proteolysis (RIP). {ECO:0000250|UniProtKB:Q949N0}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By cold, heat and drought stresses. {ECO:0000269|PubMed:17158162}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009389904.18e-21PREDICTED: uncharacterized protein LOC103976433 isoform X1
RefseqXP_009389911.19e-21PREDICTED: uncharacterized protein LOC103976433 isoform X2
RefseqXP_009397631.11e-20PREDICTED: NAC domain-containing protein 14-like isoform X1
RefseqXP_018686838.11e-20PREDICTED: NAC domain-containing protein 14 isoform X3
SwissprotB5X5706e-16NAC14_ARATH; NAC domain-containing protein 14
TrEMBLM0U5E21e-57M0U5E2_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP01300_0012e-58(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP16506913
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G33060.21e-17NAC 014