PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP02860_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bZIP
Protein Properties Length: 381aa    MW: 40960.3 Da    PI: 6.5214
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP02860_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_163.63.5e-20287349163
                                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
                         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 
                                    e+e+kr+rrkq+NReAArrsR RK+ae eeL++++++L +eN++L+ el+++k e++ l se+
  GSMUA_AchrUn_randomP02860_001 287 ERERKRQRRKQSNREAARRSRMRKQAEFEELANRAETLNEENTSLRTELNRIKSEYEHLLSEN 349
                                    799*********************************************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF077771.2E-26198IPR012900G-box binding protein, multifunctional mosaic region
PfamPF165962.8E-35137259No hitNo description
Gene3DG3DSA:1.20.5.1701.2E-16280345No hitNo description
SMARTSM003385.7E-20287351IPR004827Basic-leucine zipper domain
PfamPF001704.4E-18287349IPR004827Basic-leucine zipper domain
PROSITE profilePS5021713.553289352IPR004827Basic-leucine zipper domain
SuperFamilySSF579594.44E-11291346No hitNo description
PROSITE patternPS000360294309IPR004827Basic-leucine zipper domain
CDDcd147028.27E-18298342No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 381 aa     Download sequence    Send to blast
MGSGEGEASA KSPKPLAGQE QSPTTSSAAA VSVYPDWSNF QACPPIPPHG LFPSPVPSSP  60
QAYPYMWGAP HLMPPYGTPL PPYLTYPPRG LYSHPSVPPG LRPFGPFAMS TTNMNAENSG  120
VVPSSMEMDG KSCKGKEKGP TKRSKGGCSS SNMISEKNNS ETCKSSGPPA NEVSQSGDST  180
SDSSSEEESD DTSQNDSQPK TSGGGESFDD QAPSQAMMSH TRAVMPMPAA SAPGGVVGPA  240
TNLNIGMEYW AASSLSHIPS IHGKMPTTAV GGAVAPSAPS KHWLQDERER KRQRRKQSNR  300
EAARRSRMRK QAEFEELANR AETLNEENTS LRTELNRIKS EYEHLLSENN SLKEKLGEVQ  360
KETQEPGFER NDQPLGKENP K
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1303310RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor that may be involved in responses to fungal pathogen infection and abiotic stresses. {ECO:0000269|Ref.1}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced during incompatible interaction with the fungal pathogen Puccinia striiformis (Ref.1). Induced by abscisic acid (ABA), ethylene, cold stress, salt stress and wounding (Ref.1). {ECO:0000269|Ref.1}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009385711.10.0PREDICTED: bZIP transcription factor 68-like isoform X2
SwissprotB6E1071e-118BZP1B_WHEAT; bZIP transcription factor 1-B
TrEMBLM0U5U80.0M0U5U8_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP02860_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP21473796
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G35530.12e-34basic region/leucine zipper transcription factor 16
Publications ? help Back to Top
  1. Appels R, et al.
    Shifting the limits in wheat research and breeding using a fully annotated reference genome.
    Science, 2018.
    [PMID:30115783]