PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP04130_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family Trihelix
Protein Properties Length: 214aa    MW: 23705 Da    PI: 4.304
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP04130_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix57.63.3e-181483886
                       trihelix 38 mrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
                                   m+  g++rs+k+Ckekwen+nk+++k+ke+ kkr +++s+tcpyf+ql+
  GSMUA_AchrUn_randomP04130_001  1 MATMGYHRSAKRCKEKWENINKYFRKTKERGKKR-PQHSKTCPYFHQLD 48
                                   6778****************************98.9************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138371.4E-12150No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 214 aa     Download sequence    Send to blast
MATMGYHRSA KRCKEKWENI NKYFRKTKER GKKRPQHSKT CPYFHQLDQL YSKSHNHTPN  60
PSTSSPNADV ATANASGGSD DRRKDNSDLL DAIMAPNDGH GFKFSDMATL GFDFSSKGDE  120
SDQATAAKGS LVSHPEHDDG EEEDDDDQGG GGGGGGGGEQ YEEEEEDEEE EEEEEEGGEG  180
QGQGQENLCR PRLPLDQDED ELHDSSVFFQ RLQS
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009385847.11e-151PREDICTED: trihelix transcription factor GTL1-like
TrEMBLM0U6751e-156M0U675_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP04130_0011e-156(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP63993547
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28300.18e-23Trihelix family protein