PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP23330_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family bHLH
Protein Properties Length: 321aa    MW: 35086.5 Da    PI: 6.6619
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP23330_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH12.50.000282152521254
                                    HHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
                            HLH  12 RRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                                    R +++ ++++ L++l+ +      +K + a++L +A+ YIk L
  GSMUA_AchrUn_randomP23330_001 215 RKEKLGDRIAALQQLVAPF-----GKTDTASVLMEAIGYIKFL 252
                                    7788899*********998.....8****************88 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088812.405203252IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474593.01E-10213265IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.12E-4213257No hitNo description
Gene3DG3DSA:4.10.280.101.1E-7217260IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    Send to blast
MIQDMGCHWA CNDQEGFVNQ LPAYQLNLAK AKEELTDNSF RKLNGFFKDH SDQDHQPHEK  60
LFMRALASDC QMDGLRPLPG NLPENSSFDS YEGGHVALPT ANFSQSCPLR PGMMDDVHAL  120
DLSASAGLGG GVSFCQPSLA GMVLLGGEDA SSGLDHLQES IQGPFYLHHK MPSLVSGGTE  180
ARRCNSSWEH KSCQAAPGNP RFQQQRSSCS PFKVRKEKLG DRIAALQQLV APFGKTDTAS  240
VLMEAIGYIK FLLDQVEKLS VPYMRSSGSK KRSRTTQEAS NEEAKRDLRS RGLCLVPLAC  300
TSYMTTTEQG VWSAATYGGS D
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009388096.10.0PREDICTED: transcription factor bHLH110-like isoform X1
RefseqXP_018677513.10.0PREDICTED: transcription factor bHLH110-like isoform X2
TrEMBLM0UBP10.0M0UBP1_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP23330_0010.0(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP72403242
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G27660.15e-42bHLH family protein