PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSMUA_AchrUn_randomP26830_001
Organism
Musa acuminata
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Zingiberales; Musaceae; Musa
Family G2-like
Protein Properties Length: 98aa    MW: 11115.7 Da    PI: 10.4215
Description G2-like family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSMUA_AchrUn_randomP26830_001genomeCIRADView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like25.43.2e-081203655
                        G2-like 36 mkvkgLtlehvkSHLQkYRl 55
                                   m+ +gL  +h+kSHLQkYRl
  GSMUA_AchrUn_randomP26830_001  1 MGTNGLMFYHLKSHLQKYRL 20
                                   8999***************8 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.10.10.601.2E-6121IPR009057Homeodomain-like
PfamPF143791.1E-146598IPR025756MYB-CC type transcription factor, LHEQLE-containing domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 98 aa     Download sequence    Send to blast
MGTNGLMFYH LKSHLQKYRL GKQTRRETSQ EAKKNGSNSS KTNCSSTTNS DVSRTDGVGE  60
ILLGEALRYQ IEVQRKLQEQ LVVQKKLQMR IEALGKCL
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_009387599.16e-66PREDICTED: myb family transcription factor PHL11-like isoform X2
SwissprotC0SVS42e-21PHLB_ARATH; Myb family transcription factor PHL11
TrEMBLM0UCP11e-64M0UCP1_MUSAM; Uncharacterized protein
STRINGGSMUA_AchrUn_randomP26830_0012e-65(Musa acuminata)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP39403470
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G45580.15e-10G2-like family protein
Publications ? help Back to Top
  1. Petridis A,Döll S,Nichelmann L,Bilger W,Mock HP
    Arabidopsis thaliana G2-LIKE FLAVONOID REGULATOR and BRASSINOSTEROID ENHANCED EXPRESSION1 are low-temperature regulators of flavonoid accumulation.
    New Phytol., 2016. 211(3): p. 912-25
    [PMID:27125220]