PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSVIVT01014154001
Organism
Vitis vinifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
Family BES1
Protein Properties Length: 107aa    MW: 11846.5 Da    PI: 10.2377
Description BES1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSVIVT01014154001genomeGenoscopeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF822194.92.8e-6031022101
             DUF822   2 gsgrkptwkErEnnkrRERrRRaiaakiyaGLRaqGnyklpkraDnneVlkALcreAGwvvedDGttyrkgskpleeaeaagssasaspess 93 
                        ++ r ptwkErEnnkrRERrRRaiaaki+aGLR++Gnyklpk++DnneVlkALc+eAGw+ve+DGttyrkg+kp e+++++g sasasp+ss
  GSVIVT01014154001   3 SGARLPTWKERENNKRRERRRRAIAAKIFAGLRMYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKGCKPVERMDIVGGSASASPCSS 94 
                        789***************************************************************************************** PP

             DUF822  94 lqsslkss 101
                        ++ s++s 
  GSVIVT01014154001  95 YHPSPSSP 102
                        **887775 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF056872.0E-574104IPR008540BES1/BZR1 plant transcription factor, N-terminal
Sequence ? help Back to Top
Protein Sequence    Length: 107 aa     Download sequence    Send to blast
MTSGARLPTW KERENNKRRE RRRRAIAAKI FAGLRMYGNY KLPKHCDNNE VLKALCNEAG  60
WTVEPDGTTY RKGCKPVERM DIVGGSASAS PCSSYHPSPS SPSIHP*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5zd4_A8e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_B8e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_C8e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
5zd4_D8e-25677372443Maltose-binding periplasmic protein,Protein BRASSINAZOLE-RESISTANT 1
Search in ModeBase
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Vvi.218491e-163bud| flower
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4264481e-114AM426448.2 Vitis vinifera contig VV78X198422.9, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010644097.12e-67PREDICTED: BES1/BZR1 homolog protein 4
SwissprotQ9ZV881e-43BEH4_ARATH; BES1/BZR1 homolog protein 4
TrEMBLA0A067DLE12e-65A0A067DLE1_CITSI; Uncharacterized protein
TrEMBLA0A2H5Q4X72e-65A0A2H5Q4X7_CITUN; Uncharacterized protein
TrEMBLF6H1V62e-61F6H1V6_VITVI; Uncharacterized protein
TrEMBLV4TV522e-65V4TV52_9ROSI; Uncharacterized protein
STRINGXP_006477843.13e-66(Citrus sinensis)
STRINGVIT_19s0014g00870.t013e-62(Vitis vinifera)
STRINGXP_006442380.13e-66(Citrus clementina)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP15951542
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G78700.12e-34BES1/BZR1 homolog 4