PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSVIVT01014739001
Common NameLOC100249773, VIT_19s0015g01020
Organism
Vitis vinifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
Family bZIP
Protein Properties Length: 252aa    MW: 27650.4 Da    PI: 10.6338
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSVIVT01014739001genomeGenoscopeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.83.6e-11182236559
                        CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
             bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevakl 59 
                        k  rr++kNRe+A rsR+RK+a+ ++ + ++++L++eN+ L+  +  l   ++k 
  GSVIVT01014739001 182 KIRRRMIKNRESAARSRARKLAYDAQQQIEIAKLKKENEFLRRIIRVLLTVIKKK 236
                        6789**************************************8887765555555 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003384.2E-9178242IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1703.6E-10179239No hitNo description
PROSITE profilePS502179.427180243IPR004827Basic-leucine zipper domain
PfamPF077166.7E-10181227IPR004827Basic-leucine zipper domain
SuperFamilySSF579591.1E-6182233No hitNo description
CDDcd147079.26E-19182236No hitNo description
PROSITE patternPS000360185200IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 252 aa     Download sequence    Send to blast
MFPVFPNSNE GKSVQLSPLS LGAHLQGAQQ FQTPSSLVSD MIQPANFVLS GNWENAQESL  60
QNWMRMKSLR NKEKTLLSIG NGSGSSQFPI HRAGNVLEPM GSAGFGVGHG GAGDGHQKEL  120
PHQVINGFSM VNPYEVNAEK QAVQGAHPYH QFINMFSPGN GSTETVINTA DADATETAAA  180
EKIRRRMIKN RESAARSRAR KLAYDAQQQI EIAKLKKENE FLRRIIRVLL TVIKKKRAQV  240
TKLSRTFSEP P*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Vvi.79010.0fruit| leaf
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4745650.0AM474565.1 Vitis vinifera, whole genome shotgun sequence, contig VV78X121828.13, clone ENTAV 115.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002272719.10.0PREDICTED: G-box-binding factor 4
RefseqXP_010644623.10.0PREDICTED: G-box-binding factor 4
RefseqXP_019072698.10.0PREDICTED: G-box-binding factor 4
TrEMBLD7UAM20.0D7UAM2_VITVI; Uncharacterized protein
STRINGVIT_19s0015g01020.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP1939522
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.13e-11abscisic acid responsive elements-binding factor 2