PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID GSVIVT01020649001
Common NameVIT_12s0028g02670
Organism
Vitis vinifera
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; rosids incertae sedis; Vitales; Vitaceae; Vitis
Family VOZ
Protein Properties Length: 481aa    MW: 53469.5 Da    PI: 4.9056
Description VOZ family protein
Gene Model
Gene Model ID Type Source Coding Sequence
GSVIVT01020649001genomeGenoscopeView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1VOZ4502.6e-1381783941217
                VOZ   1 pppsaflgpkcalwdctrpaqgsewlqdycssfhatlalneglpgttpvlrpkgidlkdgllfaalsakvqgkevgipecegaatakspwna 92 
                        pppsaflgpkcalwdc+rpaqgsew+qdycssfha+lalneg+pg+tpvlrp+gi+lkdg+lfaalsak+qgk+vgipecegaat+kspwna
  GSVIVT01020649001 178 PPPSAFLGPKCALWDCPRPAQGSEWCQDYCSSFHASLALNEGPPGMTPVLRPGGIGLKDGPLFAALSAKTQGKDVGIPECEGAATSKSPWNA 269
                        89****************************************************************************************** PP

                VOZ  93 aelfdlsllegetirewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqpsssfewhlyeyeineldalalyr 184
                        +elfdls+lege irewlffdkprrafesgnrkqrslpdysgrgwhesrkqvmkefgglkrsyymdpqp+++fewhlyeyein++da+alyr
  GSVIVT01020649001 270 PELFDLSVLEGEIIREWLFFDKPRRAFESGNRKQRSLPDYSGRGWHESRKQVMKEFGGLKRSYYMDPQPLTCFEWHLYEYEINHCDACALYR 361
                        ******************************************************************************************** PP

                VOZ 185 lelklvdekksakgkvskdsladlqkklgrlta 217
                        lelklvd+kks+kgkv +dsladlqk++grlta
  GSVIVT01020649001 362 LELKLVDGKKSPKGKVINDSLADLQKQMGRLTA 394
                        *******************************97 PP
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0048578Biological Processpositive regulation of long-day photoperiodism, flowering
GO:0005634Cellular Componentnucleus
GO:0005737Cellular Componentcytoplasm
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 481 aa     Download sequence    Send to blast
MFTNLQFARK ESRTSDVAVL EEQVHQMLRE WKAELNEPSP ASSLLGGSLG SFSADINRLL  60
QRCEEEDDAT SALVEPAALK PEPDVQSLQA GNSMAFQEDY LVNHASQDHC LLGFDQCKGS  120
AFGLQNTVAN NLEMTTQSDY NQFDMHQDFD HELFIGPMGL CGQDGVPNIP GLLPNICPPP  180
SAFLGPKCAL WDCPRPAQGS EWCQDYCSSF HASLALNEGP PGMTPVLRPG GIGLKDGPLF  240
AALSAKTQGK DVGIPECEGA ATSKSPWNAP ELFDLSVLEG EIIREWLFFD KPRRAFESGN  300
RKQRSLPDYS GRGWHESRKQ VMKEFGGLKR SYYMDPQPLT CFEWHLYEYE INHCDACALY  360
RLELKLVDGK KSPKGKVIND SLADLQKQMG RLTAEFPTDV KRSTKGRTKV NKKVGARNIY  420
SAPNLMTPTA ETFSYGLSGS YNYLPENLAD YYVYLVPVHV QLELFLCVMF SLKDDIFGEI  480
*
Expression -- UniGene ? help Back to Top
UniGene ID E-value Expressed in
Vvi.22190.0cell culture| fruit
Expression -- Description ? help Back to Top
Source Description
UniprotTISSUE SPECIFICITY: Ubiquitous. Expressed in the vascular bundles of various tissues, specifically in the phloem. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Functional Description ? help Back to Top
Source Description
UniProtTranscriptional activator acting positively in the phytochrome B signaling pathway. Functions redundantly with VOZ2 to promote flowering downstream of phytochrome B (phyB). Down-regulates 'FLOWERING LOCUS C' (FLC) and up-regulates 'FLOWERING LOCUS T' (FT). Binds to the 38-bp cis-acting region of the AVP1 gene. Interacts with phyB in the cytoplasm and is translocated to the nucleus at signal transmission, where it is subjected to degradation in a phytochrome-dependent manner. {ECO:0000269|PubMed:15295067, ECO:0000269|PubMed:22904146}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By far-red light. {ECO:0000269|PubMed:22904146}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAM4876380.0AM487638.2 Vitis vinifera contig VV78X076574.4, whole genome shotgun sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010657013.10.0PREDICTED: transcription factor VOZ1
RefseqXP_019079230.10.0PREDICTED: transcription factor VOZ1
SwissprotQ9SGQ00.0VOZ1_ARATH; Transcription factor VOZ1
TrEMBLF6H4X20.0F6H4X2_VITVI; Uncharacterized protein
STRINGVIT_12s0028g02670.t010.0(Vitis vinifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
Representative plantOGRP23271335
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G28520.20.0vascular plant one zinc finger protein
Publications ? help Back to Top
  1. Ding Y, et al.
    Four distinct types of dehydration stress memory genes in Arabidopsis thaliana.
    BMC Plant Biol., 2013. 13: p. 229
    [PMID:24377444]
  2. Yasui Y,Kohchi T
    VASCULAR PLANT ONE-ZINC FINGER1 and VOZ2 repress the FLOWERING LOCUS C clade members to control flowering time in Arabidopsis.
    Biosci. Biotechnol. Biochem., 2014. 78(11): p. 1850-5
    [PMID:25351333]
  3. Kumar S,Choudhary P,Gupta M,Nath U
    VASCULAR PLANT ONE-ZINC FINGER1 (VOZ1) and VOZ2 Interact with CONSTANS and Promote Photoperiodic Flowering Transition.
    Plant Physiol., 2018. 176(4): p. 2917-2930
    [PMID:29507119]
  4. Song C,Lee J,Kim T,Hong JC,Lim CO
    VOZ1, a transcriptional repressor of DREB2C, mediates heat stress responses in Arabidopsis.
    Planta, 2018. 247(6): p. 1439-1448
    [PMID:29536220]